KEGG   Sarcophilus harrisii (Tasmanian devil): 100916101
Entry
100916101         CDS       T02286                                 
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
  KO
K06491  neural cell adhesion molecule
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03265  Virion - Ebolavirus and Lyssavirus
shr04514  Cell adhesion molecules
shr05020  Prion disease
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    100916101 (NCAM1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100916101 (NCAM1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05020 Prion disease
    100916101 (NCAM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shr04131]
    100916101 (NCAM1)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:shr04515]
    100916101 (NCAM1)
   04090 CD molecules [BR:shr04090]
    100916101 (NCAM1)
   00536 Glycosaminoglycan binding proteins [BR:shr00536]
    100916101 (NCAM1)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:shr00537]
    100916101 (NCAM1)
Membrane trafficking [BR:shr04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    100916101 (NCAM1)
Cell adhesion molecules [BR:shr04515]
 Immunoglobulin superfamily
  NCAM1/2
   100916101 (NCAM1)
CD molecules [BR:shr04090]
 Proteins
  100916101 (NCAM1)
Glycosaminoglycan binding proteins [BR:shr00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   100916101 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:shr00537]
 Others
  100916101 (NCAM1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 V-set fn3 C2-set_2 Ig_6 Ig_5 V-set_CD47 Collagen_bind_2
Other DBs
NCBI-GeneID: 100916101
NCBI-ProteinID: XP_031817062
Ensembl: ENSSHAG00000015333
Position
3:489567241..490024341
AA seq 1129 aa
MLQTKDLIWTLFFLGTAVSLQVDIVPSQGEISVGESKFFLCQVAGEAKDKDISWFSPNGE
KLTPNQQRISVVRNDDFSSTLTIYNANIDDAGIYKCIVSGEDGSESEATVNVKIFQKLMF
KNAPTPQEFREGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIKGIK
KSDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSTVNATANLGQSVILMCEAKGY
PEPTMSWTKDGEQIEIEEDDKYGFNEDSSELTIRRVDKSDEAEYVCIAENKAGEQDASIQ
LKVFAKPKINYVENKTAMELEEQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRPEK
QETLDGHIVVSSHVRVSSLTLKSIQYTDAGEYICTASNTIGQDSQAMYLEVQYAPKLQGP
VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNSPSASYLEVTPDSE
NDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDEVEPYSSTAQVQFDEPEATGGVPIL
KYKAEWRAVGEEMWHFKWYDAKEANLEGIITIMGLKPETTYAVRLSALNGKGLGEISGIS
EFKTQPVHTPPSQGEPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRAKLSSE
WKPEIRLPSGSDHVMLKALEWNAEYEVFVVAENQQGKSKAAHFVFRTSAQPTAIPANGSP
TTSLGTGAIVGILIVIFVLLLVAVDITCYFLNKCGLLMCIAVNLCGKAGPGAKGKDMEEG
KAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPELPADTTATVEDMLPSV
TTITTNSDTITETFATAQNSPTSETTTLTSSIAPPATAMPDSNSVPAGQATPSKGPVVSA
SSPPPAPAPKVAPLVDLSDTPTSAPAASNLSTSVLATQGAVLSPSAPTNVVEASKTPPGN
KAVPTPTPTNSTSPLAAVSEPAQAKQEPAATKGPDPEPAPPSAVKSPTEAATTLTSPKSE
AASVNTAKPAQGEDFKMDEGTFKTPEIDLAKDVFAALGSPAPAPAASGQAPELASSPADN
SLSPAPTKTEKAPVEAKSAPQETETQPAPAEVKTVPNEATQTNGNESKA
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgctgcaaactaaggatctcatctggactttgtttttcctgggaactgcagtttctcta
caggtggatattgttcccagtcaaggggaaatcagtgttggagaatccaaattcttctta
tgtcaagtggctggggaagctaaggataaagacatttcctggttctcccctaatggagaa
aagctgaccccaaaccagcagcggatctcagtggtacggaatgatgatttttcctccaca
cttaccatctacaacgccaacattgatgatgccggcatctacaagtgcattgtttcagga
gaggacggcagtgaatcagaggctaccgtcaatgtgaagatctttcagaaactcatgttc
aagaatgcaccaactcctcaggagttcagagagggagaagatgccgtgattgtgtgtgat
gtggtcagctcactgcctcctaccatcatctggaagcataagggccgagatgttatcctg
aaaaaagacgtcagattcatagtcctgtccaacaactatctgcagatcaagggcatcaag
aaatcagatgaggggacatatcgctgtgagggtcggatcttggcccgtggagagatcaac
ttcaaagacattcaagtcattgtaaatgtaccacccactgttcaggccaggcagagcaca
gtgaatgcaacagcaaaccttggccagtcggtcatcctgatgtgtgaggcgaaaggttat
ccagaaccaacgatgagttggacaaaagatggagaacaaattgaaatagaggaagatgat
aaatatggcttcaacgaagatagctccgaactgaccatcaggagagtggacaagagtgat
gaagccgagtatgtctgtatcgctgaaaacaaagcaggagagcaagatgcttccatccaa
ctgaaagtcttcgcaaaacccaaaattaactatgtggagaacaaaaccgcgatggagttg
gaggagcagataactcttacctgtgaagcctcaggagaccctatcccctccatcacctgg
agaacttccacaagaaacatcagcaatgaagaaaaggcttcgtggactcgaccagagaag
caagagactctggatgggcacattgtggtgagcagccacgtgcgtgtgtcttccctgaca
ctgaagagcattcagtatacggatgccggagagtacatctgcaccgccagcaacaccatt
ggccaggattcccaagctatgtacctcgaagtacaatatgcccccaagcttcagggccct
gtggctgtgtacacctgggaagggaaccaggtgaacatcacctgtgaggtgtttgcctat
cccagcgccacgatctcctggttccgagatgggcagctgctgccgagctccaactacagc
aatatcaagatatacaatagcccctctgcgagctacctagaggtgacaccagattctgaa
aatgactttggaaactacaattgcactgcagtgaatcgtattggtcaagagtccttagag
ttcatccttgtccaagcagatactccgtcttcaccatccattgatgaagtggagccatat
tccagcacggcacaggttcagtttgatgagcctgaggccacaggcggagtgcccatcctc
aaatacaaagctgagtggagagcggtgggtgaggagatgtggcatttcaagtggtatgat
gccaaggaagcgaacctggaaggtatcatcaccatcatgggcctgaagccagagacaact
tatgccgtccgactgtctgccctcaatggaaagggactgggggagatcagtgggatctct
gagttcaaaacacagccagtccacacccctccttcacaaggagaacccagtgcacccaag
ctagaaggtcagatgggagaagatgggaactctattaaagtgaacttgatcaaacaggat
gacggaggatcccccattagacactatctggtcaagtatagagcgaagctgtcttcagag
tggaaacctgaaatcagactcccctcaggcagtgaccatgtcatgctcaaagccctggaa
tggaatgccgaatatgaggtcttcgtggtggctgagaaccagcagggaaaatccaaggca
gcccattttgtatttaggacctctgcccagcccacagctatcccagccaatggtagcccc
accaccagcctgggcaccggtgccattgtgggcatcctcattgttatctttgtcctcctc
ttggtggctgtggacatcacctgctacttcctgaacaagtgtggcttgctcatgtgcatt
gctgtcaacctgtgtggaaaagctggcccaggagccaaaggaaaagatatggaggaaggc
aaagctgcattctcgaaggatgaatccaaggagcccatagtagaggtgcggacagaagag
gaacggaccccaaaccatgatggagggaaacacacagagccaaatgagaccacgccactg
acagagccagagctgccagctgacaccacagccactgttgaggacatgctgccttctgtc
accaccatcaccactaactctgacactatcaccgaaacctttgccactgctcagaacagc
cccaccagtgagaccacaaccctgacttctagcattgcccctccagccacagccatgccg
gattccaattcagtgcccgctggccaggccacgccctctaagggcccagtagtgtccgcc
tcctccccgccacctgcgcccgcccccaaagtcgcccccctcgttgacctgagcgatacc
ccgacctcagctcctgcagctagcaatttgtcgactagtgtcctggccacccagggggcc
gtcctcagccccagcgcccccaccaatgtggtcgaggcctccaagactcctcctgggaat
aaggctgttcctactcccaccccgaccaattccactagtcccctggctgctgtctcagag
cccgcccaggccaaacaggagccagctgccaccaaaggcccagacccggagcccgctccg
cccagcgcggtgaagagcccgacagaggcagccacgaccctcactagcccgaagagtgaa
gctgcctccgtcaacactgcaaaacccgcccagggcgaggactttaaaatggacgaaggg
accttcaagaccccagagattgaccttgcaaaggatgtctttgcagccctgggttctcct
gctcctgcccccgcagcgagtgggcaagcccctgagcttgcttcttcccctgcagacaac
tctctgtcacctgcaccaacaaagaccgagaaagccccagtagaagcaaagtctgcaccc
caggagacagaaacccagccagctccagcagaagtcaagacggtccccaacgaagccaca
caaacaaatggaaatgagagcaaagcgtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (20)   
   RefSeq(pep) (20)   
DNA sequence (20)   
   RefSeq(nuc) (20)   
Protein domain (11)   
   Pfam (11)   
All databases (95)   

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