KEGG   Sarcophilus harrisii (Tasmanian devil): 100921255Help
Entry
100921255         CDS       T02286                                 

Gene name
LAMC1
Definition
(RefSeq) laminin, gamma 1 (formerly LAMB2)
  KO
K05635  
laminin, gamma 1
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Prion diseases
Toxoplasmosis
Amoebiasis
Pathways in cancer
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:shr00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100921255 (LAMC1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100921255 (LAMC1)
 Cellular Processes
  Cellular commiunity
   04510 Focal adhesion
    100921255 (LAMC1)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100921255 (LAMC1)
   05222 Small cell lung cancer
    100921255 (LAMC1)
  Neurodegenerative diseases
   05020 Prion diseases
    100921255 (LAMC1)
  Infectious diseases
   05146 Amoebiasis
    100921255 (LAMC1)
   05145 Toxoplasmosis
    100921255 (LAMC1)
Cell adhesion molecules and their ligands [BR:shr04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
  Others
   LU; Lutheran blood group glycoprotein [KO:K06578]
    Laminin-10 Extracellular matrix (ECM) components
     100921255 (LAMC1)
    Laminin-11 Extracellular matrix (ECM) components
     100921255 (LAMC1)
   MCAM, CD146; melanoma cell adhesion molecule [KO:K06534]
    Laminin-8 Extracellular matrix (ECM) components
     100921255 (LAMC1)
   CXADR, CAR; coxsackievirus and adenovirus receptor [KO:K06788]
    Laminin-1 Extracellular matrix (ECM) components
     100921255 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100921255 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-3
      100921255 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100921255 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
 7. Others
  DAG1; dystroglycan 1 [KO:K06265]
   Laminin-1 Extracellular matrix (ECM) components
    100921255 (LAMC1)
   Laminin-2 Extracellular matrix (ECM) components
    100921255 (LAMC1)
  APP; amyloid beta A4 protein [KO:K04520]
   Laminin-1 Extracellular matrix (ECM) components
    100921255 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
Ensembl: 
Position
4
AA seq 1534 aa AA seqDB search
FNVTVVATNTCGAPPEEYCVQTGVTGVTKSCHLCDAGQPHLAHGAAYLTDYNNQADTTWW
QSQTMLAGVRYPSTITLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTQEDGPWIPYQYY
SGSCENTYLKPNRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSP
VLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKK
DFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCNCNGRSQECYFDPELY
RSTGHGGHCTNCQDNTDGANCERCRENFYRLGNEEACLPCHCSPVGSLSTQCDNYGRCSC
KPGVMGDKCDQCQPGFHSLTEAGCRPCSCNPAGSTDECNVETGRCVCKDNVEGFSCERCK
PGFFHLESSNPRGCTPCFCFGHSSVCTNAEGYSVHSITSTFQIDKEGWRAEERDGSETSL
QWSSESQEISVISESYFPIYFIAPDKFLGNHLLSYGQNLTFSFRVERRDTRLSAEDLVLE
GAGLRVSVPLIAQGNSYPSETTVKYIFRLHEATDYPWRPTLTPFEFQKLLNNLTSIKIRG
TYSERSAGYLDDVTLASAQRGPGVPAVWVESCTCPVGYGGQFCQLCVSGYKRETPSLGPY
SPCVLCTCNGHSETCDPETGVCNCRDNTAGPHCEKCVDGYYGDSTAGTSSDCQPCPCPGG
SSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGENGPTRLCRLCQCSDNIDPNA
VGNCNRLTGECLKCIYNTAGFYCDRCRDGFFGNPLAPNPADKCKACSCNPYGTVNQQTTC
NQVTGQCECLPHVTERDCSICDPGFYNLQSGQGCERCNCHALGSTNGQCDIRTGQCECQP
GITGQRCEQCEPNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECKEGFVGNRCDQCEEN
YFYNRSWPGCQECPACYRLVKDKVAEHRVKLQELENIIANLGTGDETVTDQAFEDRLKAA
ERDVMDLLREAQDIKDIDQNLMDRLQRVNNTLSSQISRLQNIRNTVEETGNLAEQARTRV
ESTERLIEIASRELEKAKVAIANVSITQPDSIGDPNNMTLLAEEARKLAERHKKEADDIV
RVAKTANDTSTEAYNLLLRTLAGENQTANEIEELNKKYEQAKNLSRDLEKQATRVHEEAK
RAGDKAVEIYASVAQLTPVDSVALENEANKIKKEAEALDQMMDKKLSDYEDLREDMKGKE
LEVKDLLEKGKAEQQVSPGATRSSTLPERARALASKHPPFALVGPSATPSPRSAGIASPP
GLVREGRERTHAAPFRSCARLAPRDSARPGAVLVSALALAGPANATSTKAEAERTFADVT
NLDKEVDDMLKQLQEAEKELKKKQDDADQDMMMAGMASQAAQEAEINARKAKNSVSSLLT
IINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVTDLENEAKKQEAAIVDY
NRDIEEIMKDIRNLEDIKRSLPSGCFNTPSIEKP
NT seq 4605 nt NT seq  +upstreamnt  +downstreamnt
ttcaacgtgaccgtggtggccaccaacacgtgcggcgctccgcccgaggagtactgcgtg
cagaccggggtgacgggggtcaccaagtcctgtcacctgtgcgacgccgggcagccccac
ctggcgcacggggccgcctacctgaccgactacaacaaccaggccgacaccacctggtgg
cagagccagaccatgctggccggggtgcggtatcccagcaccatcaccctcaccctgcac
ctgggaaaagcctttgacatcacatatgtgcgcctgaagtttcataccagtcgccctgag
agctttgctatctacaaacggactcaggaagatgggccctggattccataccagtactac
agtggttcctgtgagaatacctacttgaagcccaaccgtggtttcatcaggacaggagga
gatgaacagcaagcattgtgcactgatgaattcagtgacatttctcctctcactggaggc
aatgtggccttttcaacactggaaggaaggcccagtgcctacaactttgacaatagccct
gtgttgcaggaatgggtaactgccacagacattagagtaactctcaatcgcctaaatact
tttggagatgaagtatttaatgaccccaaagttttgaagtcttattattatgcaatttct
gattttgcagtgggtggcaggtgtaaatgcaatggacatgcaagtgagtgtgtgaagaag
gactttgataagttggtatgtaattgcaaacacaacacttatggagtagattgtgaaaag
tgtcttccattctttaatgaccggccatggaggagagcaactgcagagagtgccagcgaa
tgtttgccttgtaactgcaatggaagatcacaagaatgttactttgaccctgaactgtat
cgttctacgggccatggtggccactgtaccaactgtcaggataatactgatggtgccaat
tgtgaaagatgtcgggagaatttctatcgccttggaaatgaggaagcatgcctgccatgc
cattgtagccctgttggctctctcagtacacagtgtgataattatggacgatgtagctgt
aagccaggtgtgatgggtgacaaatgtgatcagtgccagcctggattccactctcttact
gaggcaggatgcaggccatgttcttgcaaccctgctggaagtacagatgaatgtaatgtt
gaaactgggcgttgtgtttgtaaagacaatgtggaaggattcagttgtgagaggtgcaaa
cctggattttttcacttggagtcatctaatcctcgaggctgtaccccttgcttttgtttt
gggcattcttctgtctgcacgaatgctgaaggatacagtgtccactctatcacttccact
ttccagatagataaggaaggatggcgtgctgaagagcgggacggctctgagacatcactc
cagtggtcttctgagagccaggagatctctgtgatctcagagagctactttcccatatac
ttcattgctcctgacaagtttttaggtaaccacctgttgagttatggtcagaatctcact
ttctcctttcgagtggaaaggcgggatacacgactctctgcagaagatctggtccttgaa
ggagctggtcttagagtatctgttcctttaattgctcagggcaactcctatcctagtgaa
accactgtgaaatacatttttagacttcacgaagcaacagattatccctggagacctacc
cttactccttttgaatttcaaaaactattaaataatttaacttctatcaagattcgtggg
acatacagtgagagaagtgctggatatttggatgatgtcactttggcaagtgctcagcgt
ggacctggggtccctgcagtttgggtagagtcctgtacctgccctgtgggatatggaggg
cagttttgtcaactgtgtgtctcaggatacaaaagggaaacacctagtcttggaccttac
agtccttgtgtgctttgtacttgcaatggacatagtgagacctgtgatcctgagacaggt
gtttgtaactgcagagataacacggctggtccacactgtgaaaagtgtgttgatggctac
tatggagattcaacagctggtacttcctctgattgtcaaccttgtccatgcccaggaggc
tcaagttgtgccgttgttcccaagacaaaggaggtggtatgcaccaattgtcccactggc
accactggtaaaagatgtgaactttgtgatgatggctactttggagatccacttggcgaa
aatggccccacaagactttgccgactttgtcaatgtagtgacaacattgatcccaatgcg
gttgggaattgtaacagattaactggagagtgcttaaaatgcatctataacactgctggc
ttttattgtgaccgctgcagagatgggttttttgggaatcccctggcccccaatccagca
gacaagtgtaaagcttgtagttgtaatccttatggtactgtgaatcaacagactacttgt
aatcaagtaactggacagtgtgaatgcctccctcacgttactgagagggattgcagtatc
tgtgatcctggattctataatctacagagtggacaaggatgtgagagatgtaactgtcat
gctctcggttccaccaatggccagtgtgacatacgcactggacaatgtgaatgtcagccg
ggcatcactggccagcgctgtgagcagtgcgagcccaaccactttggctttggacctgag
ggctgcaaaccatgtgactgtcaccctgaggggtcactttcactccagtgcaaagatgat
ggtcgttgtgaatgcaaggaaggttttgtgggaaatcgctgtgaccagtgtgaagaaaat
tatttctataatcggtcttggcctggctgtcaagagtgtcctgcatgttatagactagtg
aaagataaagttgctgagcatcgagtgaagctccaggagttagagaacattatagcaaac
cttggaactggagatgaaacagttacagatcaagcttttgaggacagactgaaggcagct
gagagagatgttatggacctactacgtgaggcccaggacatcaaagatatagaccagaac
ctgatggatcgcctccagagggtcaataataccctgtccagtcaaatcagtcgcttgcag
aatatccgtaacactgtggaagaaaccggaaatttagctgagcaagcccgcactcgagtt
gagagcacagaaagacttattgaaatcgcttccagagaactggagaaagcaaaagtggcc
attgccaacgtgtcaattacccaaccagattctattggcgatcctaacaacatgactctg
ttggcagaagaagctcgtaaacttgctgaacgacataaaaaagaagctgatgacattgta
cgggtagccaagacagccaatgatacatcaactgaagcctataatctactcctaaggact
ttggctggagagaatcaaacagcaaatgaaattgaagaacttaataagaaatatgaacaa
gcgaaaaacctctcacgagatctagagaaacaggctacccgagtacatgaagaagcaaaa
cgagctggagacaaagctgttgagatttatgctagtgttgcccagctgacacctgtggat
tctgtggctcttgagaatgaggctaataagataaagaaggaagcagaggccctggaccaa
atgatggacaaaaagctgagcgactacgaggacctccgggaggacatgaaaggcaaggag
cttgaagtgaaggacctcctggaaaagggaaaggcggagcagcaggtgagccccggggcc
acacggtcttctactttgccggaacgagcccgtgcccttgcttctaaacatccgcccttt
gccctcgtgggcccgagcgcgacccccagcccccgctctgccgggatagcgtctcccccg
ggcttggtgcgggaaggaagggagagaacgcacgcggcgcctttccgaagttgtgcgcgc
ctcgctccacgagatagcgcccggccaggtgccgttttagtgagcgccctggccctggct
gggcccgcgaatgctaccagtaccaaagcagaggcagaaagaacttttgcagatgttaca
aatttggataaagaggtggatgacatgctgaaacagttacaagaagcagaaaaggaacta
aagaaaaagcaagatgacgctgatcaggatatgatgatggcaggaatggcttcacaggct
gctcaagaagcagagattaatgcaagaaaggccaagaactctgttagtagccttctcacc
atcatcaatgacctcttggaacaactcggacaactggacactgtggacctgaacaagctc
aatgagatcgaaggcaccctgaacaaagccaaagatgagatgaaggtcagtgatctcgac
agaaaagtaaccgatctggagaatgaagccaagaaacaggaggctgccattgtggactac
aacagagatattgaggaaatcatgaaagacattcgcaacctcgaagatatcaagaggagc
ttgccctcaggctgcttcaacaccccctccattgagaaaccctaa

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