KEGG   Sarcophilus harrisii (Tasmanian devil): 100921255Help
Entry
100921255         CDS       T02286                                 

Gene name
LAMC1
Definition
laminin, gamma 1 (formerly LAMB2)
Orthology
K05635  
laminin, gamma 1
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Prion diseases
Toxoplasmosis
Amoebiasis
Pathways in cancer
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:shr00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100921255 (LAMC1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100921255 (LAMC1)
 Cellular Processes
  Cell communication
   04510 Focal adhesion
    100921255 (LAMC1)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100921255 (LAMC1)
   05222 Small cell lung cancer
    100921255 (LAMC1)
  Neurodegenerative diseases
   05020 Prion diseases
    100921255 (LAMC1)
  Infectious diseases
   05146 Amoebiasis
    100921255 (LAMC1)
   05145 Toxoplasmosis
    100921255 (LAMC1)
Cell adhesion molecules and their ligands [BR:shr04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100921255 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-3
      100921255 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100921255 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100921255 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100921255 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
4
AA seq 1535 aa AA seqDB search
AFNVTVVATNTCGAPPEEYCVQTGVTGVTKSCHLCDAGQPHLAHGAAYLTDYNNQADTTW
WQSQTMLAGVRYPSTITLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTQEDGPWIPYQY
YSGSCENTYLKPNRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNS
PVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVK
KDFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCNCNGRSQECYFDPEL
YRSTGHGGHCTNCQDNTDGANCERCRENFYRLGNEEACLPCHCSPVGSLSTQCDNYGRCS
CKPGVMGDKCDQCQPGFHSLTEAGCRPCSCNPAGSTDECNVETGRCVCKDNVEGFSCERC
KPGFFHLESSNPRGCTPCFCFGHSSVCTNAEGYSVHSITSTFQIDKEGWRAEERDGSETS
LQWSSESQEISVISESYFPIYFIAPDKFLGNHLLSYGQNLTFSFRVERRDTRLSAEDLVL
EGAGLRVSVPLIAQGNSYPSETTVKYIFRLHEATDYPWRPTLTPFEFQKLLNNLTSIKIR
GTYSERSAGYLDDVTLASAQRGPGVPAVWVESCTCPVGYGGQFCQLCVSGYKRETPSLGP
YSPCVLCTCNGHSETCDPETGVCNCRDNTAGPHCEKCVDGYYGDSTAGTSSDCQPCPCPG
GSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGENGPTRLCRLCQCSDNIDPN
AVGNCNRLTGECLKCIYNTAGFYCDRCRDGFFGNPLAPNPADKCKACSCNPYGTVNQQTT
CNQVTGQCECLPHVTERDCSICDPGFYNLQSGQGCERCNCHALGSTNGQCDIRTGQCECQ
PGITGQRCEQCEPNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECKEGFVGNRCDQCEE
NYFYNRSWPGCQECPACYRLVKDKVAEHRVKLQELENIIANLGTGDETVTDQAFEDRLKA
AERDVMDLLREAQDIKDIDQNLMDRLQRVNNTLSSQISRLQNIRNTVEETGNLAEQARTR
VESTERLIEIASRELEKAKVAIANVSITQPDSIGDPNNMTLLAEEARKLAERHKKEADDI
VRVAKTANDTSTEAYNLLLRTLAGENQTANEIEELNKKYEQAKNLSRDLEKQATRVHEEA
KRAGDKAVEIYASVAQLTPVDSVALENEANKIKKEAEALDQMMDKKLSDYEDLREDMKGK
ELEVKDLLEKGKAEQQVSPGATRSSTLPERARALASKHPPFALVGPSATPSPRSAGIASP
PGLVREGRERTHAAPFRSCARLAPRDSARPGAVLVSALALAGPANATSTKAEAERTFADV
TNLDKEVDDMLKQLQEAEKELKKKQDDADQDMMMAGMASQAAQEAEINARKAKNSVSSLL
TIINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVTDLENEAKKQEAAIVD
YNRDIEEIMKDIRNLEDIKRSLPSGCFNTPSIEKP
NT seq 4610 nt NT seq  +upstreamnt  +downstreamnt
ccgccttcaacgtgaccgtggtggccaccaacacgtgcggcgctccgcccgaggagtact
gcgtgcagaccggggtgacgggggtcaccaagtcctgtcacctgtgcgacgccgggcagc
cccacctggcgcacggggccgcctacctgaccgactacaacaaccaggccgacaccacct
ggtggcagagccagaccatgctggccggggtgcggtatcccagcaccatcaccctcaccc
tgcacctgggaaaagcctttgacatcacatatgtgcgcctgaagtttcataccagtcgcc
ctgagagctttgctatctacaaacggactcaggaagatgggccctggattccataccagt
actacagtggttcctgtgagaatacctacttgaagcccaaccgtggtttcatcaggacag
gaggagatgaacagcaagcattgtgcactgatgaattcagtgacatttctcctctcactg
gaggcaatgtggccttttcaacactggaaggaaggcccagtgcctacaactttgacaata
gccctgtgttgcaggaatgggtaactgccacagacattagagtaactctcaatcgcctaa
atacttttggagatgaagtatttaatgaccccaaagttttgaagtcttattattatgcaa
tttctgattttgcagtgggtggcaggtgtaaatgcaatggacatgcaagtgagtgtgtga
agaaggactttgataagttggtatgtaattgcaaacacaacacttatggagtagattgtg
aaaagtgtcttccattctttaatgaccggccatggaggagagcaactgcagagagtgcca
gcgaatgtttgccttgtaactgcaatggaagatcacaagaatgttactttgaccctgaac
tgtatcgttctacgggccatggtggccactgtaccaactgtcaggataatactgatggtg
ccaattgtgaaagatgtcgggagaatttctatcgccttggaaatgaggaagcatgcctgc
catgccattgtagccctgttggctctctcagtacacagtgtgataattatggacgatgta
gctgtaagccaggtgtgatgggtgacaaatgtgatcagtgccagcctggattccactctc
ttactgaggcaggatgcaggccatgttcttgcaaccctgctggaagtacagatgaatgta
atgttgaaactgggcgttgtgtttgtaaagacaatgtggaaggattcagttgtgagaggt
gcaaacctggattttttcacttggagtcatctaatcctcgaggctgtaccccttgctttt
gttttgggcattcttctgtctgcacgaatgctgaaggatacagtgtccactctatcactt
ccactttccagatagataaggaaggatggcgtgctgaagagcgggacggctctgagacat
cactccagtggtcttctgagagccaggagatctctgtgatctcagagagctactttccca
tatacttcattgctcctgacaagtttttaggtaaccacctgttgagttatggtcagaatc
tcactttctcctttcgagtggaaaggcgggatacacgactctctgcagaagatctggtcc
ttgaaggagctggtcttagagtatctgttcctttaattgctcagggcaactcctatccta
gtgaaaccactgtgaaatacatttttagacttcacgaagcaacagattatccctggagac
ctacccttactccttttgaatttcaaaaactattaaataatttaacttctatcaagattc
gtgggacatacagtgagagaagtgctggatatttggatgatgtcactttggcaagtgctc
agcgtggacctggggtccctgcagtttgggtagagtcctgtacctgccctgtgggatatg
gagggcagttttgtcaactgtgtgtctcaggatacaaaagggaaacacctagtcttggac
cttacagtccttgtgtgctttgtacttgcaatggacatagtgagacctgtgatcctgaga
caggtgtttgtaactgcagagataacacggctggtccacactgtgaaaagtgtgttgatg
gctactatggagattcaacagctggtacttcctctgattgtcaaccttgtccatgcccag
gaggctcaagttgtgccgttgttcccaagacaaaggaggtggtatgcaccaattgtccca
ctggcaccactggtaaaagatgtgaactttgtgatgatggctactttggagatccacttg
gcgaaaatggccccacaagactttgccgactttgtcaatgtagtgacaacattgatccca
atgcggttgggaattgtaacagattaactggagagtgcttaaaatgcatctataacactg
ctggcttttattgtgaccgctgcagagatgggttttttgggaatcccctggcccccaatc
cagcagacaagtgtaaagcttgtagttgtaatccttatggtactgtgaatcaacagacta
cttgtaatcaagtaactggacagtgtgaatgcctccctcacgttactgagagggattgca
gtatctgtgatcctggattctataatctacagagtggacaaggatgtgagagatgtaact
gtcatgctctcggttccaccaatggccagtgtgacatacgcactggacaatgtgaatgtc
agccgggcatcactggccagcgctgtgagcagtgcgagcccaaccactttggctttggac
ctgagggctgcaaaccatgtgactgtcaccctgaggggtcactttcactccagtgcaaag
atgatggtcgttgtgaatgcaaggaaggttttgtgggaaatcgctgtgaccagtgtgaag
aaaattatttctataatcggtcttggcctggctgtcaagagtgtcctgcatgttatagac
tagtgaaagataaagttgctgagcatcgagtgaagctccaggagttagagaacattatag
caaaccttggaactggagatgaaacagttacagatcaagcttttgaggacagactgaagg
cagctgagagagatgttatggacctactacgtgaggcccaggacatcaaagatatagacc
agaacctgatggatcgcctccagagggtcaataataccctgtccagtcaaatcagtcgct
tgcagaatatccgtaacactgtggaagaaaccggaaatttagctgagcaagcccgcactc
gagttgagagcacagaaagacttattgaaatcgcttccagagaactggagaaagcaaaag
tggccattgccaacgtgtcaattacccaaccagattctattggcgatcctaacaacatga
ctctgttggcagaagaagctcgtaaacttgctgaacgacataaaaaagaagctgatgaca
ttgtacgggtagccaagacagccaatgatacatcaactgaagcctataatctactcctaa
ggactttggctggagagaatcaaacagcaaatgaaattgaagaacttaataagaaatatg
aacaagcgaaaaacctctcacgagatctagagaaacaggctacccgagtacatgaagaag
caaaacgagctggagacaaagctgttgagatttatgctagtgttgcccagctgacacctg
tggattctgtggctcttgagaatgaggctaataagataaagaaggaagcagaggccctgg
accaaatgatggacaaaaagctgagcgactacgaggacctccgggaggacatgaaaggca
aggagcttgaagtgaaggacctcctggaaaagggaaaggcggagcagcaggtgagccccg
gggccacacggtcttctactttgccggaacgagcccgtgcccttgcttctaaacatccgc
cctttgccctcgtgggcccgagcgcgacccccagcccccgctctgccgggatagcgtctc
ccccgggcttggtgcgggaaggaagggagagaacgcacgcggcgcctttccgaagttgtg
cgcgcctcgctccacgagatagcgcccggccaggtgccgttttagtgagcgccctggccc
tggctgggcccgcgaatgctaccagtaccaaagcagaggcagaaagaacttttgcagatg
ttacaaatttggataaagaggtggatgacatgctgaaacagttacaagaagcagaaaagg
aactaaagaaaaagcaagatgacgctgatcaggatatgatgatggcaggaatggcttcac
aggctgctcaagaagcagagattaatgcaagaaaggccaagaactctgttagtagccttc
tcaccatcatcaatgacctcttggaacaactcggacaactggacactgtggacctgaaca
agctcaatgagatcgaaggcaccctgaacaaagccaaagatgagatgaaggtcagtgatc
tcgacagaaaagtaaccgatctggagaatgaagccaagaaacaggaggctgccattgtgg
actacaacagagatattgaggaaatcatgaaagacattcgcaacctcgaagatatcaaga
ggagcttgccctcaggctgcttcaacaccccctccattgagaaaccctaa

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