KEGG   Sarcophilus harrisii (Tasmanian devil): 100926708Help
Entry
100926708         CDS       T02286                                 

Gene name
RXRA
Definition
(RefSeq) retinoid X receptor, alpha
  KO
K08524  
retinoid X receptor alpha
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
PPAR signaling pathway
PI3K-Akt signaling pathway
Thyroid hormone signaling pathway
Adipocytokine signaling pathway
Non-alcoholic fatty liver disease (NAFLD)
Bile secretion
Hepatitis C
Pathways in cancer
Transcriptional misregulation in cancer
Thyroid cancer
Small cell lung cancer
Non-small cell lung cancer
Brite
KEGG Orthology (KO) [BR:shr00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100926708 (RXRA)
 Organismal Systems
  Endocrine system
   04920 Adipocytokine signaling pathway
    100926708 (RXRA)
   03320 PPAR signaling pathway
    100926708 (RXRA)
   04919 Thyroid hormone signaling pathway
    100926708 (RXRA)
  Digestive system
   04976 Bile secretion
    100926708 (RXRA)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100926708 (RXRA)
   05202 Transcriptional misregulation in cancers
    100926708 (RXRA)
   05216 Thyroid cancer
    100926708 (RXRA)
   05222 Small cell lung cancer
    100926708 (RXRA)
   05223 Non-small cell lung cancer
    100926708 (RXRA)
  Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    100926708 (RXRA)
  Infectious diseases
   05160 Hepatitis C
    100926708 (RXRA)
Transcription factors [BR:shr03000]
 Eukaryotic Type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100926708 (RXRA)
Nuclear receptors [BR:shr03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100926708 (RXRA)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
Position
1
AA seq 467 aa AA seqDB search
MDTKHFLPLDFSTQVNSTSLNSPTGRGSMAAPSLHPSIGPGLGSSLGSSSQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt NT seq  +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccgctggatttttccacccaggtcaattccacatccctg
aattcccccactggcagagggtccatggctgccccctccctgcacccgtccattggcccc
ggccttggctcgtccctcggatcatccagccagctgcactcccccatcagcactctgagc
tcccccattaatggcatgggccctcccttctctgtcatcagctcccccatggggcctcac
tcaatgtctgttcccacaacccccacccttgggtttgggaccggcagcccccagctcaac
tcgccaatgaaccctgtcagcagcacagaagatattaagccacctcttgggctcaatgga
gttcttaaagtgcccgcccatccctcaggaaccatggcctccttcaccaagcacatatgt
gccatctgtggggaccgctcctcaggtaaacattatggtgtgtacagttgtgaaggctgc
aaaggcttcttcaagagaacggtccgcaaggacctcacctacacctgccgagataataag
gactgcctgattgacaaacgccagaggaaccggtgccaatactgccgctaccagaagtgt
cttgccatgggcatgaagcgagaagctgtgcaagaagagaggcagaggggcaaagaccgg
aatgagaacgaggtggaatcaaccagtagtgctaatgaggacatgccagtggaaaagatc
ttggaagctgaactcgctgtggagccaaagacagagacgtacattgaggcaaacatggga
ctgaatcccaattcgcccaacgaccccgttaccaacatttgccaagcagcagacaaacag
ctcttcaccttggtggaatgggccaagagaatcccccacttctcagaactacccctggat
gaccaggtcattctattgcgagcgggctggaatgaactgctcatcgcctcgttctctcac
cgctcgatagcagtgaaagatgggatccttcttgccaccggcctccacgtccataggaac
agcgctcacagtgcaggggtgggcgccatctttgacagagtcctgacagaacttgtgtca
aaaatgcgagacatgcagatggacaagacagagctgggctgcctgagagccattgtcctc
ttcaaccctgactctaaaggactttccaaccctgcggaagtagaagccctacgagagaaa
gtttacgcttccctcgaagcctactgcaaacacaagtatccggaccagcctgggaggttc
gccaagctcttgctccgtctccccgctctccggtccatcggtctgaaatgcttggagcac
ctcttcttcttcaagctaataggagatacccccattgacaccttcctgatggagatgttg
gaggcaccccaccaaatgacatag

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