KEGG   Sarcophilus harrisii (Tasmanian devil): 100927233
Entry
100927233         CDS       T02286                                 
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shr03009]
    100927233 (DDX54)
Enzymes [BR:shr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100927233 (DDX54)
Ribosome biogenesis [BR:shr03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    100927233 (DDX54)
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT ResIII DNA_pol3_chi
Other DBs
NCBI-GeneID: 100927233
NCBI-ProteinID: XP_031804494
Ensembl: ENSSHAG00000015646
Position
1:complement(690641869..690659975)
AA seq 862 aa
MSTVRPRGSRRGRERDRRRHLAGAMGDFEIQPEGGGSVEAREMGPSKSLPTFPALEAASD
VEPDTQEMIRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDV
VAMARTGSGKTACFLIPMFEKLKAHSAQTGARALILSPTRELALQTMKFTKELGKFTGLK
TALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLHSVQYAVFDEADRLFEMG
FAEQLQEIISRLPEDHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKMAFF
HIREDDKPAVLLHLLRNVVRPQDQTVVFVATKHHAEYLTELLTTQGVCCTHIYSSLDQTA
RKINLAKFVHGKCSALIVTDVAARGLDIPLLDNVINYNFPAKSKLFLHRVGRVARAGRSG
TAYSLVAPDEVPYVFDLHLFLGRPLVLARPHEKPSDASPDGVLGRVPRNVVDDEECRLLT
DHDGSSELQSLRRVAENAHKQYSRSRPGPSPESIKRAKDLDPTLLGLHPLFSSQFEDEEL
ERMKLVDSIKNYRSRATIFEINTTTRDPGSQVMRAKRKRDHKAIAKFQQGQQERQQAQPG
PAPCLPTSQEPEEEQEEEQDVEEAFTQVLGPKRRRPSAPGQEKRRKGAPQQRQEEFYVPY
RPKDFDSERGLSIGGEGSAFEQQASGAVLDLMGDEAHSLTKSRQQLKWDRKKKRFVGATG
QEDKKKIKTESGRYISSSYKRDLYQKWKQKHKIGDRDSDEEEEGAARRRGWNRGRGRGRG
ASAGRTSGAGGTSGAGGRVRSELKNKQQILKQRRRAEKQRFLQRGGLKQLSARNRRRAQE
LRQSAFGRRPGGNRKGKMRKKM
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgagcacggtcagacccaggggttcgcggcgcggacgggagcgcgatcgccgccgacac
ttggctggtgccatgggagacttcgagatccagcccgaaggcggtggaagcgtggaagcc
cgggagatgggtcccagtaagtccctgcctaccttccctgctttggaggcagcctcagat
gtggagcccgacacccaggaaatgattcgtgcccaaaacaagaagaagaaaaagtctgga
ggctttcagtccatgggtttgagctaccctgtcttcaagggcatcatgaagaagggctac
aaggtgcccacacccatccagaggaagactattccggtgattctggacggcaaggatgta
gtagccatggcccgaacgggtagtggaaagacggcctgcttcctcatccccatgtttgag
aaactcaaggcccacagtgcccagacaggtgcccgagccctcatcctctcgcccacccga
gagctggccctgcagaccatgaaattcaccaaggagctgggcaagttcaccggcctgaag
acagccctgatccttgggggagacaagatggaagaccagtttgcagccctgcatgagaac
ccagatataatcatcgccaccccagggcgcctgatgcacgtggccgtggagatgaacctg
aaactgcacagtgtgcaatacgctgtctttgatgaggcggataggctgtttgaaatgggc
tttgccgagcagctacaggaaatcatcagccgccttcccgaggaccaccaaaccgtgctc
ttttcggccacgctgccgaagctcctcgtggagtttgcccgtgctgggctcacggagccg
gtgctgatccgtctcgatgtggacaccaaactcaacgagcagttgaagatggccttcttc
cacatccgcgaggacgacaagccagccgtgctcctccacctcctgcgcaacgtcgtccgg
ccccaggaccagactgtggtcttcgtggccacaaagcaccacgcggagtacctcacagag
ctgctgacaacccagggtgtttgctgcacccacatctacagctcccttgaccagacggcg
cgcaagatcaacctggccaagtttgtgcatggcaagtgctccgccctcatcgtcaccgac
gtggccgcccggggcctggacatcccgctgctggacaacgtgatcaactataacttccct
gccaagagcaagctcttcctgcatcgagtggggcgcgtggcccgcgcaggccgaagcggc
accgcgtattccctggtggccccggatgaggtcccctacgtctttgaccttcacctcttc
ttgggccgccccctcgtcctcgccaggccccacgagaagccctcagatgcctctccagat
ggtgtgctgggtcgtgtgcctcggaacgtggtggacgacgaggagtgccgcctgctcacg
gaccacgacggctcctcggagctccagagcctgcggcgcgtggccgagaacgcccacaag
cagtacagccgttctcggccggggccctccccagagtccatcaagagggccaaggacctg
gaccccaccctcctaggcctgcaccccctcttcagctcccagtttgaggacgaggagttg
gagaggatgaaacttgtggacagcatcaagaactaccgctcccgggctaccatctttgag
attaacaccacgacccgggatccgggtagccaggtgatgcgggccaagcggaagcgggac
cacaaagccattgccaagttccagcaggggcagcaggagcggcagcaggcccagcccggc
ccggccccctgcctgcccacgagccaggagccagaggaggagcaggaggaggagcaggac
gtggaggaggccttcacccaggtcctgggcccaaagagacggcggccctcagcaccgggc
caggagaagaggcggaagggggcaccccagcagcggcaagaggagttctatgtgccctac
cggcccaaggatttcgacagcgagcggggcctgagcatcgggggcgagggcagcgccttc
gagcagcaggcgtctggagccgtccttgacctcatgggcgacgaggcccacagcctcacc
aagagccggcagcagctgaagtgggaccgtaagaagaagcggtttgttggggccacgggc
caggaggacaaaaagaagataaagacggagagcggccggtacatcagcagctcttataag
agggacctctatcagaagtggaagcagaagcacaagattggggaccgggactcggacgag
gaggaagagggagcggccaggaggcgaggctggaatcggggccgaggccggggccgaggg
gcctcagcaggccggacgtcaggggccggtgggacgtcaggggccggtgggcgcgtgcgc
tcagagctgaagaacaagcagcagatcctgaagcagcgtcgccgtgcagagaagcagcgt
ttcctgcaacgagggggtctcaagcagctgtctgcccgcaaccggcgccgggcccaggag
ctgcggcagagcgcctttggcaggcggcctgggggcaaccgaaagggcaagatgaggaag
aagatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system