KEGG   Sarcophilus harrisii (Tasmanian devil): 100930400
Entry
100930400         CDS       T02286                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04145  Phagosome
shr04540  Gap junction
shr04814  Motor proteins
shr05010  Alzheimer disease
shr05012  Parkinson disease
shr05014  Amyotrophic lateral sclerosis
shr05016  Huntington disease
shr05020  Prion disease
shr05022  Pathways of neurodegeneration - multiple diseases
shr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:shr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100930400 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    100930400 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    100930400 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100930400 (TUBB1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100930400 (TUBB1)
   05012 Parkinson disease
    100930400 (TUBB1)
   05014 Amyotrophic lateral sclerosis
    100930400 (TUBB1)
   05016 Huntington disease
    100930400 (TUBB1)
   05020 Prion disease
    100930400 (TUBB1)
   05022 Pathways of neurodegeneration - multiple diseases
    100930400 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shr03036]
    100930400 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:shr04812]
    100930400 (TUBB1)
   04147 Exosome [BR:shr04147]
    100930400 (TUBB1)
Chromosome and associated proteins [BR:shr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100930400 (TUBB1)
Cytoskeleton proteins [BR:shr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100930400 (TUBB1)
Exosome [BR:shr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100930400 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   100930400 (TUBB1)
  Exosomal proteins of bladder cancer cells
   100930400 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 PBP_sp32 DUF5041
Other DBs
NCBI-GeneID: 100930400
NCBI-ProteinID: XP_031807551
Ensembl: ENSSHAG00000013053
Position
2:236222574..236231742
AA seq 467 aa
MREIVHIQIGQCGNQIGSKFWEVIGEEHGIDVNGSYQGDSPLQLQRINVYYKEAYDKTYV
PRAVLVDLEPGIMDSIRSSNLGTLFQPDNFVHGNSGAGNNWAKGYYTEGAELIEQVLDVV
RYESENCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNAVLSIHQLIENTDACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL
RFPGQLNADLRKLAVNMVPYPRLHFFMPGFAPLTARGTQQYRALTVAELTHQMFDARNMM
AACNPRNGRYLTVACIFRGKLSTKEVDEQMLKMQTRNSSYFVKWIPNNVKVAVCDIPPRG
LTMAAIFMGNNTAIQELFIRVTEQFSAMFKRKAFIHWYTGEGMDLNEFLEAESNIQDLIT
EYQQCQDGKTIQKKQQHKNEKEAETESEESEETEETEETENEESTEE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcgtacatattcagattggccagtgtgggaaccagatcggatccaagttc
tgggaagtgattggggaggagcacgggattgatgtcaatgggagctaccaaggagattca
cccctgcagcttcaaagaataaatgtttactacaaagaagcctatgataaaacgtacgtg
cctcgagctgtcttagtggatctggagcctggtatcatggacagcatccggtctagcaac
ttaggaaccctctttcaacctgataattttgtccacggtaattcaggagctggcaacaat
tgggcaaagggttactatacagaaggcgctgaactgattgaacaagtgttggatgtggtc
aggtatgagagtgagaactgtgactgccttcagggttttcagatagtccactcactgggg
ggaggaactggatctggtatgggtactctccttatgaataagatcagagaagaatatcca
gaccggattatgaatacctttagcataatgccttctcctaaagtctctgatacagttgta
gagccatataatgcggtactttccatccatcagctcattgagaacaccgatgcatgcttc
tgtattgataatgaagccctatatgatatatgcttcagaactttaaagttgacaactccc
acttacggtgacctcaatcacttggtgtccttgacaatgagtgggattactacctccctt
cgctttcctggtcaacttaatgctgatctgagaaaactggcagtgaacatggttccttac
ccccggctccacttctttatgcctggctttgccccactgacagcccggggcactcagcag
tacagagctctcaccgttgctgaacttacccaccagatgtttgatgcccgtaacatgatg
gctgcctgtaacccccgcaatggacgttacttaactgtagcctgtatttttcgaggcaag
ctatccaccaaggaagtggacgaacagatgctcaagatgcaaaccagaaatagcagttat
tttgtgaagtggattcccaacaatgtcaaagtagctgtgtgtgacatcccaccacggggg
ctaactatggctgcaatctttatggggaataacactgcaattcaggagttatttatcagg
gttactgagcaattttcagctatgttcaaaaggaaggcttttatccactggtacactggt
gaagggatggacttaaatgaatttctagaagcagaaagtaacatccaagatttgataaca
gaatatcaacaatgtcaagatggcaaaacaatccagaagaagcagcagcataagaatgaa
aaagaagctgagacagaatcagaagaatcagaagaaacagaagaaacagaagaaacagaa
aacgaagagtcaacagaggaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (110)   
   KEGG ORTHOLOGY (1)   
   RefGene (105)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (7)   
   Pfam (7)   
All databases (144)   

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