KEGG   Shewanella sp. W3-18-1: Sputw3181_0067Help
Entry
Sputw3181_0067    CDS       T00453                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
shw  Shewanella sp. W3-18-1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:shw00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sputw3181_0067
Enzymes [BR:shw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sputw3181_0067
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sputw3181_0067
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(84303..85118)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRQGIAPYLVEQTVIDLVIRNGSLRWPVPDIAKQIIGQVIRQVRRRAKYLL
IDTDAGTSIVHLGMSGSLRILPHDTPVEKHDHIDLVLANGRILRFNDPRRFGAWLWCELP
EEAHPLLAKLGPEPLTNAFNVKQLAAALTGKKKAIKLCLMDNHIVVGVGNIYANEALFAA
GIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTLKDFTNADGKPGYFAQKLHVYGR
GGETCTSCGNLLSEIRLGQRTTVFCGICQTR
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattaccagaagttgaagtcacccgtcagggtattgccccctaccttgtcgag
caaaccgtaatagatcttgtgatccgcaatggctctttgcgctggcctgtgcctgacatc
gccaaacagattatcggtcaagttatacgccaagtgcgacgccgtgctaagtatctgtta
atcgacactgatgcgggcactagcatagtgcatttaggcatgtcggggagtttacggatt
ttgccccacgataccccagtggaaaagcatgaccatatcgacttagtgctcgccaacggc
cgcattttacgttttaacgatccaagacgattcggtgcttggctatggtgtgaactccca
gaagaagcgcatccattacttgccaaactggggccagagccactgactaatgcttttaat
gtcaaacaattagcagcagctttaacgggcaagaaaaaagcgatcaaactctgtctgatg
gataatcatatcgtagtgggagtgggcaacatttacgccaatgaagccctgtttgcggcg
ggcattcatccagaggccgaagcaggtaaaatagatatagagcgtttgaccgttttagtt
gccgaagtgaagcaaatcttagcccacgccattaagcaaggcggcactacgctcaaagac
tttaccaatgccgatggcaagccgggctacttcgcccaaaaactgcatgtctacggtcgc
ggcggtgaaacctgcaccagctgcggtaacctactgagtgagatccgtttaggccagcgc
accacagtattctgtggcatttgccagacacgctaa

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