KEGG T00453: Sputw3181

Shewanella sp. W3-18-1: Sputw3181_1069

Entry

Sputw3181_1069    CDS       T00453

Name

(GenBank) NusA antitermination factor

K02600

transcription termination/antitermination protein NusA

Organism

shw Shewanella sp. W3-18-1

Brite

KEGG Orthology (KO) [BR:shw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shw03021]
    Sputw3181_1069
   03009 Ribosome biogenesis [BR:shw03009]
    Sputw3181_1069
Transcription machinery [BR:shw03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Sputw3181_1069
Ribosome biogenesis [BR:shw03009]
Prokaryotic type
  rRNA transcription factors
   Sputw3181_1069

SSDB

Motif

Pfam:

NusA_N KH_5 HHH_5 S1 DUF2187 KH_2

Other DBs

NCBI-ProteinID:

ABM23919

UniProt:

A0A6N3J2H1

Position

1213846..1215345

AA seq 499 aa
MNKEILLVAEAVSNEKAVPREKIFEALEIALATATKKKYDGDIDVRVAIDRKTGGYETFR
RWMVVDDHGEALENPFREITLEAARYENPDIQPGEFIEDDIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFRDKEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLSRTKPEMLIELFRVEVPEIADELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVV
SLFINSLDVDEDFAQVLANEGFTSLEEVAYVPVSELLAIDGFDEDLVEALRERAKAAIST
RALASEEALDGVEPSDELLALEGVERHLAYVLASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGTLIMAARNICWFGEEA

NT seq 1500 nt +upstreamnt +downstreamnt
atgaataaagagatcctgctagtcgctgaagcggtttcaaatgaaaaggccgttccacgc
gagaaaatttttgaagcgctagagatcgctctggctactgcaaccaagaaaaaatacgat
ggcgatattgatgtccgcgttgcgattgaccgcaaaacgggtggctatgagacattccgc
cgttggatggtcgttgatgatcacggtgaagccttagaaaacccatttcgcgagattacg
cttgaggcggctcgttatgaaaatccggatattcaaccgggtgagtttatcgaagacgat
atcgagtctgttgtatttgaccgcattacgactcaaaccgccaaacaagtgatcgtacaa
aaggtacgtgaagctgaacgtgctcaagtggttgagcagttcagagataaagaaggcgaa
ctgatcactggcgttgtgaaaaaagcaacccgtgaaagtgtcgtggtcgatttaggcaat
aatgctgatggcgtgctgttccgtgaagatttaatttcacgcgaatctttccgccctggt
gaccgtgtgcgtgcattattgtactcagtacgtccagaagctcgcggtgcacaattattc
ctaagccgtactaaacccgaaatgctgattgagcttttccgtgttgaagtacctgaaatc
gctgatgaattgatcgaagtcatgggcgcagcccgtgatccaggcgcacgcgctaagatc
gcggttaagtcgaatgatcgccgtatcgatcctatcggtgcgtgtgttggcatgcgcggc
gcacgtgtacaagcagtatcaaatgaactgggtggcgagcgtgttgatatcgtattgtgg
gatgataatccagcacaatatgtgatcaatgccatggcgccagctgatgtagcttctatc
atcgtcgacgaagataaccattcaatggatatcgcggttgaggctgatagtttggcacaa
gccattggacgtaatggccagaacgtacgtttagcaactcaacttacgggttgggaactg
aacgtaatgacagtggaagacatgaataagaaacatcaggctgaaagtgccaaagtggtg
agtctgtttattaattcactggatgtcgatgaagattttgcacaagtactagcgaatgag
ggctttacgtcgcttgaagaggtcgcttatgtacctgtgtctgaattattggcgatagac
ggtttcgacgaggatctcgttgaagctttacgtgaacgtgcaaaagctgcgatctcgaca
agagcgctcgcttctgaagaagcactggatggtgtggagccaagtgatgagttgttagca
cttgaaggtgttgaaagacacttagcctatgttttagcaagcaaaggtattgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtacgctcatcatggctgcccgcaacatctgttggtttggcgaagaagcataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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