KEGG T00453: Sputw3181

Shewanella sp. W3-18-1: Sputw3181_1600

Entry

Sputw3181_1600 CDS T00453

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

shw Shewanella sp. W3-18-1

Pathway

shw00260	Glycine, serine and threonine metabolism
shw00400	Phenylalanine, tyrosine and tryptophan biosynthesis
shw01100	Metabolic pathways
shw01110	Biosynthesis of secondary metabolites
shw01230	Biosynthesis of amino acids

Module

shw_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:shw00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:shw00400]

SSDB

Motif

Pfam:

Trp_syntA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1824442..1825278)

AA seq 278 aa
MSDTLTNTSLYQAARYQATFAKLKAEGRGAFVPFVTLGDPSPELSLKIIDTLVQNGADAL
ELGFPFSDPLADGPVIQGANLRSLAAGTTPTACFELLAQVRAKYPELPIGLLLYANLVFA
NGIDAFYAKAQQAGVDSVLIADVPVEESAPFSEAAKAHGIAPIFIAPPNADSETLEQVSK
SGEGYTYLLSRAGVTGTDTKAGVPVEEILSKLKAFNAPPPLLGFGIAEPSQVSAAIKAGA
AGAISGSAVVKIIETHQHDEVKLLATLGEFTRAMKAAT

NT seq 837 nt +upstreamnt +downstreamnt
atgagtgatacattgactaacacaagcctttaccaagcggcccgttaccaagccaccttt
gccaaactcaaggccgaaggccgtggcgcttttgtccccttcgtcacccttggcgatcct
agccctgagttatcgctaaaaattatcgatactttagtgcaaaacggcgccgatgcctta
gaactgggctttccgttttccgatcccttggccgatggcccagtgatccaaggcgctaac
ctgcgttctttagccgcaggcacgactccaacggcgtgttttgaattactggcgcaagtg
cgtgctaaatatcctgaacttccaatcggtttgctgctgtatgcgaacttggtgtttgct
aacggcatcgatgctttctacgctaaagcgcagcaagcgggtgtggattcagtgcttatc
gccgatgtgccagtggaagaatccgcgccctttagcgaagccgctaaagcccatggtatt
gcgccgatttttatcgcgccgcccaatgccgacagtgaaacccttgaacaagtgagtaaa
agtggtgaaggttacacctatctcttatcccgcgcgggagtcacaggcacagacacgaaa
gctggcgtgccggtagaggaaattttatctaaattaaaagcctttaacgccccgccaccg
ctcctcggttttggtattgccgagccttcacaggtaagcgccgccatcaaagcgggcgct
gcaggggcgatttctggctctgccgtagtaaaaatcatcgaaacccaccagcacgatgaa
gttaagctacttgcaacgcttggggaatttactcgcgcaatgaaggctgcgacctaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHW (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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