KEGG   Shewanella sp. W3-18-1: Sputw3181_3003
Entry
Sputw3181_3003    CDS       T00453                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
shw  Shewanella sp. W3-18-1
Pathway
shw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Sputw3181_3003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shw03400]
    Sputw3181_3003
DNA repair and recombination proteins [BR:shw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Sputw3181_3003
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Sputw3181_3003
SSDB
Motif
Pfam: RecO_N RecO_C
Other DBs
NCBI-ProteinID: ABM25820
UniProt: A0A6N3J6I4
Position
complement(3428586..3429296)
AA seq 236 aa
MKRGYVLHHRPYRESSVLVNLLVDGIGRVDVVARTGSGKRSIKSILQPFQPLIFEFSGKS
ELKTLTQIEAAAPAVPLSGQSLFAGMYINELLVRTLSVQHHAEALFLIYHRALVGLAAKF
CQSQLRYIELALLQELGAMPSLSRDTQGEPLVPEDYYQLVPELGFQFVLNSRARNAYQGA
MLMALNDNQLTEAQFLSAKLLMRSLLTPLLGTKPLLSRQLFVSSAAPTKIDGNNSP
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaaacgtggctatgttctgcatcatcgtccgtatcgagagtccagtgtcttagttaac
cttttagttgatggcattggtcgggttgatgtggttgcccgaacgggcagcggtaagcgc
tctatcaagagcattctccaaccttttcaaccgctgatctttgaatttagcggtaagtct
gagttaaaaacattaacccaaatcgaagcggctgcgcctgcggtacctctttctggccaa
agtttgtttgcaggcatgtatatcaatgagttactggttcgcactctgtctgtgcagcac
cacgccgaagcgttatttctcatttatcaccgagccttagtcggtcttgccgcgaagttt
tgccaatcccagttgcgttatattgaactcgccttactgcaagagttaggcgcaatgcca
tcccttagccgcgatactcagggtgagccactcgtgcctgaggattattatcagctggtg
cctgagttaggctttcaatttgtgctcaattcccgtgctcgcaacgcctatcaaggtgcc
atgctgatggcgcttaacgataatcaattgactgaagcgcaatttttgagcgctaagtta
ttgatgcgctcattgttaacgccattactcgggactaaacctctgctcagtcgacaattg
ttcgtgagctctgccgcgccaactaagattgatgggaataattcgccctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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