KEGG T02063: SHJG

Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3060

Entry

SHJG_3060         CDS       T02063

Name

(GenBank) ribosomal pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

shy Streptomyces hygroscopicus subsp. jinggangensis 5008

Brite

KEGG Orthology (KO) [BR:shy00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shy03009]
    SHJG_3060
   03016 Transfer RNA biogenesis [BR:shy03016]
    SHJG_3060
Enzymes [BR:shy01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     SHJG_3060
    5.4.99.29  23S rRNA pseudouridine746 synthase
     SHJG_3060
Ribosome biogenesis [BR:shy03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SHJG_3060
Transfer RNA biogenesis [BR:shy03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    SHJG_3060

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

AEY88334

Position

3601524..3602474

AA seq 316 aa
MRRRTPPPPAPLPQREGVDPVRVRLPVDGAWATVREHLVERLTGAPAGVVESMFAAGLVV
GADGRAVAPDAPYRPGMFVWFHRELPAEVPVPFPVEVVYRDEHIVVADKPHFLATTPRGA
HVAETALARLRRELGIPALTAAHRLDRLTAGLVLFTVRPEERGAYQSLFRDRRVRKEYEA
VAPYDPALVLPRTVRSRIVKERGVPAAREVPGEPNAETRVELAGHRAGLGRYRLVPTTGQ
THQLRVHLTALGVPILGDPLYPEVTAPVPAGDFRRPLQLLARRLEFTDPVTGTEHTFTSA
RALLAWTSHEAWADGS

NT seq 951 nt +upstreamnt +downstreamnt
atgagacgccgtaccccgcccccgcccgccccgctcccccagcgcgagggcgtggacccc
gtccgcgtccggctgcccgtggacggggcgtgggccaccgtgcgggagcatctggtggag
cggctgacgggggccccggccggggtggtcgagtcgatgttcgccgccgggctggtggtc
ggggccgacgggcgggccgtggcgccggacgcgccgtaccggccggggatgttcgtctgg
ttccaccgcgagctgcccgccgaggtgccggtgccgttcccggtggaggtggtgtaccgg
gacgagcacatcgtggtggccgacaagccgcacttcctggccacgaccccgcgcggtgcg
cacgtcgccgagaccgcgctggcccggctccggcgtgagctgggcattccggcgctgacg
gcggcgcaccggctggaccggctgaccgccgggctggtgctgttcaccgtgcggcccgag
gagcggggcgcgtaccagtcgctcttccgggaccggcgggtgcgcaaggagtacgaggcg
gtggcgccgtacgatccggcgctcgtcctgccccggaccgtgcgcagcaggatcgtgaag
gagcgcggggtgccggccgcgcgggaggtgccgggcgagccgaacgcggagacccgggtg
gaactggccgggcaccgggccgggctcggccgctaccggctcgtgccgaccaccgggcag
acccaccagctccgggtgcacctgaccgcactgggcgtgcccatcctcggcgacccgctg
taccccgaggtgaccgccccggtaccggccggcgacttccgccgccccctgcaactgctc
gcccgcaggctggagttcaccgacccggtcaccggcacggaacacacgttcaccagcgcc
cgcgcgttgctcgcatggacgtcgcacgaggcctgggcggacgggtcctag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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