KEGG   Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_7861Help
Entry
SHJG_7861         CDS       T02063                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:shy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SHJG_7861
Enzymes [BR:shy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SHJG_7861
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SHJG_7861
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
8951690..8952553
Genome map
AA seq 287 aa AA seqDB search
MPELPEVAALTDFLTEHLVGRRVVRVLPVAISVLKTYDPPVTAVEGAEVTAVRRHGKFLD
VETDGGLHLVAHLARAGWLQWKDRLPDGPPKPGKGPLALRVALETGEGFDLTEAGTQKRL
AVYVVRDPEEVPGIARLGPDPLAGDFDEDRFAALLQGERRQLKGALRDQSLIAGVGNAYS
DEILHAAKMSPFKLAASLTPEETHRLYEALRDTLTEAVERSRGVAAGRLKAEKKGGLRVH
GRTGEACPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcccgaggtagcagcgctgacggacttcctcaccgagcacctggtcgga
cggcgggtggtgcgggtgctgcccgtggccatcagcgtcctgaagacgtacgaccccccg
gtcacggccgtcgagggggccgaggtgacggccgtgcgccggcacggcaagttcctggac
gtcgagacggacggcgggctgcacctggtggcccatctggcccgcgcgggctggctccag
tggaaggaccggctgcccgacggcccgccgaagccagggaagggcccgctggcgctgcgc
gtggccctggagaccggcgagggcttcgacctgaccgaggccggcacccagaagcgcctc
gccgtgtacgtcgtccgcgacccggaagaggtgcccggcatcgcccgcctcggcccggat
ccgctcgccggcgacttcgacgaggaccgcttcgccgccctgctccagggtgaacggcgg
cagctcaagggtgccctgcgcgaccagtcgctgatcgcgggcgtcggcaacgcctacagc
gacgagatcctgcacgccgcgaagatgtccccgttcaagctggccgcctccctcaccccg
gaggagacccaccggctgtacgaggcgctgcgcgacacgctcaccgaggcggtcgagcgc
tcccggggcgtggccgccgggcggctgaaggcggagaagaagggcggcctgcgcgtccac
ggccgcaccggcgaggcctgcccggtgtgcggcgacaccatccgcgaggtctccttcagc
gactcctcgctccagtactgccccacctgccagacgggcggcaagcccctggccgaccgc
cggctgtcccgcctgctgaaatga

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