KEGG   Sphingobium xenophagum: CJD35_03570
Entry
CJD35_03570       CDS       T05146                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
shyd  Sphingobium xenophagum
Pathway
shyd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CJD35_03570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shyd03400]
    CJD35_03570
DNA repair and recombination proteins [BR:shyd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CJD35_03570
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CJD35_03570
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_30 Kinesin SWI2_SNF2 AAA_16 DUF87 Microtub_bd UB2H AAA_22 eIF3_p135
Other DBs
NCBI-ProteinID: ASY43636
UniProt: A0A249MQL2
Position
I:719364..721547
AA seq 727 aa
MAIQIRTTLDEPDTETSFVPHRPARPDKSEGGRPFKLVSDYEPSGDQCTAIPELVEQALA
GERDQVLLGVTGSGKTFTMAKVIEALQRPALILAPNKILAAQLYGEFKSFFPDNAVEYFV
SYYDYYQPEAYVARSDTYIEKESSVNESIDRMRHSATRSLLERDDCIIVASVSCLYGIGS
VETYSAMTFSMKKGGIEDQREIIRKLVALQYKRNDAGFARGNFRVKGDNLEIFPSHYEDT
AWRISFFGNEIEAIVEFDPLTGKKVASLDYVKVFPNSHHVTPGPTLKQAMEAIRFELAER
LKELESEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGKWEMEQTGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLINECRKVTANGYRTL
VTTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERALNETGR
RREKQEAYNREHGITPTTIKRNIGDIIAHVANKDSVLVETGDADRPHMVGHNLRAYIEDL
EKKMRAAAADLEFEEAGRIRDEIRKLEAEELGLPHDQQVAAPKGRATEGKPGTRKLRYGK
TQKKFGR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggccatccagatccgcaccacgctcgacgagcccgacaccgaaaccagcttcgtgccg
catcgccccgcgcgaccggacaagagcgagggcgggcgcccgttcaagctggtgagcgat
tatgagccatcgggcgaccaatgcaccgcgatccccgaactggtggaacaggcactggca
ggcgagcgcgatcaggtgctgctgggcgttacgggctccggcaagaccttcaccatggcc
aaggtgatcgaggcgttgcagcgcccggcgctgatcctggctcccaacaagatcctcgcc
gcgcagctttatggcgagttcaaaagcttctttcccgacaatgcggtcgaatatttcgtc
agctattatgattattaccagcccgaagcctatgtggcgcggtcggacacttatatcgag
aaggaaagcagcgtaaacgagagcatcgaccggatgcgccattcggccacgcggtcgctg
ctggaacgggacgactgcatcatcgtcgcatccgtttcctgcctctatggcatcggctcg
gtagaaacctattcggccatgaccttttccatgaagaagggcgggatagaggatcagcgc
gagatcatccgcaagctggtcgcgctccaatataagcgcaacgacgcaggttttgcgcgc
ggcaatttccgggtgaagggcgacaatctggaaatcttcccgtcccattatgaggatacc
gcctggcgcatatcctttttcggcaacgagattgaggccatcgtcgagttcgacccgctg
accggcaagaaggtcgccagcctcgattatgtgaaagtctttcccaacagccaccatgtc
acccccggcccgacgctgaagcaggcgatggaggcgatccgcttcgaactggccgaacgg
ctcaaggagctggagagcgagggcaagttgctggaggcgcagcggctggagcagaggacc
aatttcgacctggagatgatcgcggcgacgggatcatgcgcgggaatcgaaaattacagc
cgcttcctgactggccgcctgcccggcgaaccgccgccgaccctgtttgaatatctcccc
gaaaacgcgctgctgttcgtggatgaaagccaccagaccgtgccgcagatcggcgcgatg
gcgcgcggcgaccatcggcgcaagatcacgctggccgaatatggcttccgcctgccgtcc
tgcatcgacaaccgtccgctgcgcttcaacgaatgggacgccatgcggcctcagacggtc
agcgtctccgccacgcccggcaaatgggaaatggagcagaccggcggcgtgttcagcgaa
caggtgatccgccccaccggcctcattgaccccccggtcgagatcaagccggtcgaggat
caggtggacgacctgatcaacgaatgccgcaaggtcacggccaatggctatcgcaccctg
gtcaccacgctgaccaagcggatggccgaggatttgaccgaattcatgcatgaggcggga
atcaaggtccggtacatgcatagcgatgtcgagacgctggagcggatcgaactgatccgt
gacctgcggcttggcgtctatgacgtgctgatcggcatcaacctgctgcgtgaagggctg
gacatccccgaatgcgggctggtcgccattctggacgcggacaaggaaggctttttgcgt
tccgaaacctcgctgatccagaccatcgggcgcgcggcgcggaacgtggacgggcgggtg
atcctctatgccgaccggatcaccggcagcatggaacgcgcgttgaacgaaaccgggcgg
cggcgcgagaagcaggaagcctataaccgcgaacatggcatcacgccgacgacgatcaag
cgcaacatcggcgacatcatcgctcatgtggccaacaaggacagcgtgctggtggaaacc
ggcgatgccgaccggccccacatggtcggccacaatctgcgcgcctatatcgaggatctg
gaaaagaagatgcgcgccgccgccgctgacctggaatttgaggaagcgggacggatcagg
gacgaaatccgcaagctggaggcggaggaattgggcttgccgcacgatcaacaggtggca
gcgcccaagggacgcgcgaccgaaggcaagccgggtacgcggaagttgcgctatggcaag
acccaaaagaaattcgggcggtag

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