KEGG   Sphingobium xenophagum: CJD35_05215
Entry
CJD35_05215       CDS       T05146                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
shyd  Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shyd02048]
    CJD35_05215
Enzymes [BR:shyd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CJD35_05215
Prokaryotic defense system [BR:shyd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CJD35_05215
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII nSTAND3 CbiA DUF1490 DUF87 Helicase_C
Other DBs
NCBI-ProteinID: ASY43918
UniProt: A0A249MRH0
Position
I:complement(1066894..1070172)
AA seq 1092 aa
MTPNTAELYSSHIPALATLVSLGWDYLSPEGCLAARGGNQGVVLRDELVEQLRRRTFDYK
GRTYPLSTNAIDQIVRELTSPALNEGLITANEKLYNAITLGVTVTEFVDGKKHSVTVPII
DWAHPLANSFVVSDEMEVLAVPGTHTRRPDIVGFVNGIPLLVIEAKRPDSGNPNKSMVDE
GISQTIRNQGQEEIPHLFAYAHLLLSIGMTDGRYGTTKTPRKFWAQWREEEFSEDHFRQI
KNPVQEIDPRATILKNHVREVRDHFRRLWSDKQAVTAQDRPLIGLCTPDRLLEFVRSYVL
FDRKADKIVARHQQFFGIRALLDQISRVKPDGAREGGVIWHTTGSGKSFTMVMLCKALLL
HEKLKTCRLVVVTDRRDLEKQLAGNFLTGGAFGSDVGAKDAGKAKAQSGRDLAKRIGKGT
ERIIFTIINKFGSAARHAECRNNSADMIVLVDEGHRSQGGENHERMRKALPNAAYVAFTG
TPLLKDDKTANKFGRIVHAYTMKDAVSDGTVTPLLYEERKPILDVNERAIDNWFEKVTAG
LSEEQRGDLKKKFGTKGAVYGSGDRINLIALDIATHFKENFKDYDLGLKGQLATDSKRSA
IRYKKALDATGLVSSAIIISPPDTREGHSEVDEAELPEVLQWWKENVRGEPEDYERQVIE
DFSTEGRPDILIVVDKLLTGFDEPRNAVLYIDKKLEQHNLIQAIARVNRLHEQKKYGLLI
DYRGILKALDTALTEYQDLAERTQGGFDLDDIDQLYADVSTEYKRLPSLHAELWAIFRPV
KNRADIEQYRQLLVPQTRESEGGSPIDLNQKIREDFYEALTAYGMCLKIALGSRSFFEDT
SISEVQIAEYKRDLKFFTNLRKIVKQDAQEAVDYSAYEDQIRRLVDRYVVGEDVENVGGV
LIVNELGNQPTAETWSPEKTRNETDIIRSRVRKTIEQELADDPYAQLFFSDLLRRAIAEA
SALFDHPYKQYVLFKDLEEKLAAKTVDDLPKGLEGHRHASAYFGIIRLEMGDVVAEAVEQ
EEFIHAALDMEKFVENAIAENSLNPANIEAAIRKALLPRLFGLTGLEKAKVITDKIVEVT
RVGLARGNGAKA
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgacacctaataccgccgagctatacagttcccatatcccagccctcgcaacgctggtt
tcactgggctgggattatctgtcgcccgaaggttgtcttgctgcgcgaggaggcaaccaa
ggagtagtgctgcgcgatgaattggtcgagcagctacggcggcggaccttcgactacaaa
ggacggacctacccgctctcgaccaacgcgatcgaccagatcgtccgcgagttgacatcg
cccgcactcaatgaagggctgatcacagccaacgagaagctctacaatgccatcacgctg
ggcgttacggtcaccgagttcgtcgacggaaagaagcacagcgtcaccgtgccgatcatc
gactgggcgcacccgctggcaaacagctttgttgtcagtgatgagatggaggtgctcgcc
gtaccgggcacccacacgcggcggcctgatatcgtcggcttcgtcaacggcatcccgctg
ctggtgatcgaagccaagcggcccgacagtggcaatcccaacaagtcgatggtcgacgaa
gggatcagccaaacgatccgcaatcaggggcaggaggaaatcccgcacctgttcgcctat
gcccatttgctgctctccatcggcatgactgatggacgctatggcaccaccaagaccccg
cgcaagttctgggcgcaatggcgcgaagaggagttttccgaggaccatttccgccagatc
aagaaccccgtacaggaaatcgatccgcgcgcgacgatcctgaagaaccatgtgcgtgaa
gtgcgtgaccactttcggcgcctgtggagcgacaagcaggccgtcaccgcacaagaccga
ccgctgatcggcctctgcacgcctgaccgtctgctggaattcgtccgctcttacgtcctg
ttcgaccgcaaggcggacaagatcgtcgcccgacatcagcaatttttcggcatccgcgcg
ctgcttgaccagatcagccgggtcaagcccgatggcgcacgcgaaggcggggtgatttgg
cacaccaccggttcgggcaagagcttcacgatggtgatgctgtgcaaggcgctgctgctg
cacgagaagctgaagacctgccgtctggtggtcgtgaccgaccggcgtgatctggaaaag
caactagcgggcaacttcctgaccggcggggccttcggctcggacgttggcgccaaggat
gcaggcaaggccaaggcccaatcgggccgcgacctggccaagcgcatcggcaaaggaact
gagcggatcatcttcacgatcatcaacaagttcggcagcgccgcgcgccacgcagaatgc
cgcaacaacagcgctgacatgatcgtgctggtcgatgaaggccaccgtagccaaggcggc
gagaaccacgagcggatgcgcaaggcgctgccaaacgccgcctatgttgcgttcaccggc
acgccgctgctgaaggacgacaagacggccaacaaattcgggcggatcgttcacgcctac
acgatgaaggacgccgtgtcggacggcacggtgacgccgctgctctacgaggaacggaaa
ccgatcctcgacgtgaacgagcgcgcgatcgacaactggttcgagaaggtaaccgcgggc
ctttccgaggagcaaaggggcgatctcaagaagaagttcgggaccaagggcgcggtctat
ggctctggcgaccggatcaatctgatcgcactcgatatcgcgacccatttcaaggaaaac
ttcaaggattatgatctcggcctgaagggacagttggctaccgattcaaagcggtcagct
atccgttacaagaaggcgctggatgcaaccggtctggtcagcagcgccatcatcatttcg
cctcctgatacccgcgaaggccattcggaagttgatgaggcagagctgcccgaggtgctg
caatggtggaaggaaaacgtgcgtggcgagcccgaggattacgagcgccaagttatcgag
gatttctcgaccgagggccgacccgacatcctgatcgtggtcgacaagttgctcactgga
tttgatgaaccgcgcaacgctgtcctctatatcgacaagaagctcgaacagcacaatctg
atccaggccatcgcccgcgtgaaccggctgcatgagcaaaagaagtacggtttgctcatc
gactatcggggcattctgaaggcgctggataccgcgctcacggaatatcaggacctcgct
gaacgcactcagggcggcttcgatctcgacgacatcgaccaactctacgccgatgtcagc
accgagtataagcgattgccaagcctacacgccgagctctgggcgattttcaggccggtc
aagaacagggccgatatcgagcagtatcggcagctgctggtgccacagactcgcgagagc
gagggcggatcacctatcgacctgaaccagaagatcagggaggatttctacgaggcgctg
acagcctacggcatgtgtttgaagatcgctctggggtcgcgttccttcttcgaagacaca
tcgatctccgaggtgcaaattgcggaatacaagcgcgaccttaagttctttaccaacctt
cgcaagatcgtgaagcaggacgcacaggaagccgtcgattacagtgcctacgaagaccag
atcaggaggctggtcgatcgctatgttgtgggtgaggacgtggagaacgtgggcggcgtt
ctgatcgtcaacgagcttgggaatcaaccgaccgccgaaacctggtctcctgagaaaacc
cgcaacgaaaccgatatcatccgatccagagtgcgcaaaacgattgagcaggaattggct
gacgatccctatgcgcagctatttttttccgaccttctcaggcgcgccattgcggaagcg
tccgcgctgttcgatcacccctacaaacagtatgttctgttcaaagacttggaggaaaag
ctggctgccaagaccgtcgacgatctgcccaaaggcctcgaaggtcaccgccacgccagc
gcctatttcgggattatccggctggagatgggggatgtggtcgctgaagcggttgaacaa
gaggagttcatccacgcagcactggatatggagaagtttgtcgagaacgccatagcggaa
aactcgctgaatccagcaaacattgaagcggccatccgtaaagccttattgccgcgtctc
ttcggcttgaccggcttggagaaggccaaagtcatcaccgacaagattgtcgaggtcacc
cgcgtcggccttgctcgtggtaatggcgcgaaggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (55)   

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