KEGG   Sphingobium xenophagum: CJD35_14325
Entry
CJD35_14325       CDS       T05146                                 
Name
(GenBank) glutamate--tRNA ligase
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
shyd  Sphingobium xenophagum
Pathway
shyd00860  Porphyrin metabolism
shyd00970  Aminoacyl-tRNA biosynthesis
shyd01100  Metabolic pathways
shyd01110  Biosynthesis of secondary metabolites
shyd01120  Microbial metabolism in diverse environments
shyd01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    CJD35_14325
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CJD35_14325
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:shyd01007]
    CJD35_14325
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shyd03016]
    CJD35_14325
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shyd02048]
    CJD35_14325
Enzymes [BR:shyd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     CJD35_14325
Amino acid related enzymes [BR:shyd01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   CJD35_14325
Transfer RNA biogenesis [BR:shyd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CJD35_14325
 Prokaryotic type
   Other AARSs
    CJD35_14325
Prokaryotic defense system [BR:shyd02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    CJD35_14325
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-ProteinID: ASY45476
UniProt: A0A249MVU7
Position
I:2935739..2937160
AA seq 473 aa
MNKPVVTRFAPSPTGFLHIGGARTALFNWLFARHHGGKFLLRIEDTDRARSTEEAVAAIF
DGLDWLGLGGDEPAVFQFARTPRHAEVANAMLANGHAYKCYATPEELAELREQQRAAKQP
MRYDGRWRDRSPEEAPEGAPFVIRLKAPREGETVIEDAVQGRVVVQNAELDDMILLRSDG
TPTYMLAVVVDDNDMGVTHVIRGDDHLNNAFRQLCIIRAMGWDEPVYAHIPLIHGSDGAK
LSKRHGALGVDAYRDDMGMLPEAVLNYLLRLGWGHGDEEIIPIDRAIELFDISGVGRSPA
RFDIKKLENLNGHYLREADDARLAALVAPRVAARLDRALPDTGLALLTAAMPSLKPRAKT
LNEIAEGAEFLFKNCPLDFDEKALALLDDSARALLVKTADALRPVQTWTVEAIEDAIRRV
AEDAGLGLGKVAQPLRAALTGRTVSPGIFDVLFLLGKEGSLERLTDVGHASVG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgaacaagccggtagtgacccgtttcgcgccatcgccaaccgggttcctgcatattggc
ggcgcgcgcaccgctttgttcaactggctgttcgcgcgtcaccatggcggcaaattcctg
ctgcggatcgaggataccgaccgcgcccgctcgaccgaagaagcggtggcggccattttc
gacgggctggattggctgggtctgggcggtgatgaaccggccgtgtttcaattcgcccgc
acgccgcgccacgccgaagtcgccaacgcgatgctggcgaacggccatgcctataaatgc
tatgccacgcccgaagaactggccgaactgcgcgaacagcagcgcgcggccaagcagccg
atgcgttatgacgggcgctggcgcgaccgttcgcccgaagaagcgcctgaaggcgcgcct
ttcgtcatccgcctgaaagccccgcgcgaaggcgaaacggtgatcgaggacgcggtgcag
ggccgtgttgtcgtacagaatgccgagctggacgatatgatcctgctacggtccgatggc
acgcccacctatatgctggccgtcgtcgtcgacgataatgacatgggcgtcacccatgtg
atccgcggcgacgatcatctcaacaacgccttccgccagctttgcatcatccgtgccatg
ggttgggacgagccggtctatgcccatatcccgctgatccacggatcggacggcgcgaaa
ttgtccaagcgccacggggcgctgggcgtggatgcctatcgtgacgatatggggatgctc
cccgaagcggtgctcaactatctgctgcggctgggctggggtcatggcgacgaggagatt
atcccgatcgaccgcgccatcgagctgttcgacatcagcggcgtcggccgatcgcccgcg
cgcttcgacatcaagaagctggaaaatctgaacggccattatctgcgcgaagccgacgac
gcccgcctcgccgcgctggtcgcgccgcgcgtcgccgcccgtctggatcgcgccttgccg
gacaccggcctggcgctattgacggccgcgatgccctcgctcaagccgcgcgccaaaacg
cttaatgaaattgccgagggcgccgaatttctgttcaaaaattgcccactggattttgac
gaaaaggcattggctctgctagacgactcggcgcgcgcgctgctggtcaagacagccgac
gctttgagaccagttcaaacatggacggtcgaagcgatcgaggacgcaattcgccgcgtg
gcggaggatgccggcctggggctgggcaaggtggcgcagccgcttcgggcggcactcacc
gggcgcaccgtctcgccgggtatttttgatgtcctcttcctgttggggaaagaggggagc
ttggaacggctgaccgatgttgggcacgcatcggttggctga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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