KEGG   Sphingobium xenophagum: CJD35_17950
Entry
CJD35_17950       CDS       T05146                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
shyd  Sphingobium xenophagum
Pathway
shyd03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CJD35_17950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shyd03400]
    CJD35_17950
DNA repair and recombination proteins [BR:shyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CJD35_17950
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ASY46347
UniProt: A0A249MYV3
Position
II:693505..694374
AA seq 289 aa
MPARAYWQGQIKLALVSIPVEIYPATKSGPAISFRQIHEPSGKPIHYDKVVSGIGPVDRD
EIFKGYEISKGNYVLLDQEEIESVKIESRKTLDLVQFVDADAIDVLYYEKPYFVVPADDL
AEEAYTVLRDALRQTKKVGLGQLSVRGREQLVSLKPCGRGLVLEVLRYADEVNKAQSYFR
GLPGDEADPEMLDLAVSIIEKRTAPFEPEEFHDRYVDALHRLIDKKKKAKGKRIIEDVDD
EPAGAKAGNVIDLMAALKKSAGSGKSATTKSTAAKAKPKKAAASKRKSA
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcccgcacgcgcatattggcagggtcaaatcaagctggcgctggtttcgattccggtc
gaaatctatcctgccaccaagtctggaccggccatatccttccgccagatccacgaaccc
agcggcaagccgatccattacgacaaggtggtcagcggcatcggtccggtcgatcgcgac
gaaatcttcaaaggatatgagatttccaagggcaattacgtcctgttggatcaggaagag
attgagtcggtgaagatcgagagtcgcaagactctggacctcgttcaatttgtcgacgcc
gatgcgattgatgtgctttactatgaaaagccctatttcgtggtccccgccgacgatctg
gcggaggaagcctatactgtgctgcgcgatgcgctgcggcagacgaagaaagtcggcctg
gggcagttatccgtgcgtgggcgcgaacaactggtgtcgctcaagccctgcggacgcggg
ttggtgctggaagtgctgcgctatgccgatgaagtcaacaaggcccagagctattttcgc
ggactccctggcgatgaggctgacccggagatgctcgacctggccgttagcatcatcgag
aagcgcacagcccccttcgagccggaggagtttcacgaccgctatgtcgatgcgcttcac
cgtctgatcgacaagaaaaagaaggcgaagggcaagcggatcatcgaggatgtcgacgat
gaaccggccggggccaaggcaggcaatgtcatcgacctgatggccgcactgaaaaaatcc
gctggatcgggcaagagcgcgaccacaaaaagcaccgccgccaaggccaagcccaaaaaa
gccgcagcgtcaaaacgcaagagcgcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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