KEGG   Shinella sp. HZN7: shn_22000
Entry
shn_22000         CDS       T04278                                 
Name
(GenBank) conjugal transfer protein TraI
  KO
K20533  type IV secretion system protein TrbI
Organism
shz  Shinella sp. HZN7
Pathway
shz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    shn_22000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_22000
Secretion system [BR:shz02044]
 Type IV secretion system
  Trb secretion system protein
   shn_22000
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ANH06445
UniProt: A0A1A9G5I4
Position
4586054..4587238
AA seq 394 aa
MSDTDHDNAEPLDQSTPAVDTSSSMRLRAEPPRVTRLSRKVLAGVTAVALVGIGGSLIYA
LQTRDPGKSADELYSTDNRTTADGLAGLPRDYTGPVLGPALPGDLGRPIVSAQNQGHPVV
PPAMAAPGPDPEEQRRLAELEAARTSRVFFQAGPAATSATAGSNVPGFAGVGAGTQPGAE
TAQDRQLAFLNAPVDRRTIAADRIMAPASPYVLQAGAVISAALITGIRSDLPGQVTAQVT
ENIYDSPTGRILVIPQGTRIIGQYDNSVQYGQSRVLLVWNRIILPNGRSIVLERQPGADT
QGYAGLEDGVDYHWWDLAKAAGLSTLLSVGSELAIDDQDRLLRAIRNGGQDTINDAGQQI
VRRQLNVAPTLTIRPGFPVRVIVTRDLVLEPYGG
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgagcgacaccgaccacgacaatgccgaaccgctggatcaatcgacccccgccgtcgat
acgtcatcatccatgcgtctgcgggcggaacctccgcgtgtcacccggctgtcgcgcaaa
gtgctcgccggcgtcaccgcggttgccctcgtcggcatcggcggctctctcatctacgcg
ctccagacccgagatcccggcaagagcgccgacgaactctattcgaccgacaaccgcacc
acggccgacggcctggccggcctgccacgcgattacaccggcccggtcctcggcccggcg
ctgcctggagacctcggccgcccgatcgtcagcgcgcaaaatcaggggcatcctgtcgtg
ccgcccgccatggcggcgccggggcctgatcccgaggaacaacgtcgcctcgccgaattg
gaggccgctcgcaccagccgcgtgtttttccaggctggtccggccgcaacctcggcgacc
gctggctcgaatgtcccgggatttgccggcgtgggagctggcacacaaccaggtgccgag
acggctcaagatcgacaactcgcgttcctcaatgctcccgtcgaccgccgcaccattgcg
gccgaccgcatcatggcgccagcatcgccctatgtcctccaggcgggcgcggtcatctcg
gccgccctcatcaccggcatccgctccgatctgcctggacaagtcaccgcgcaggtgacg
gagaacatctacgatagcccgaccgggcgcatcctcgtcatcccgcagggcacgcggatc
atcggccagtacgacaatagcgtccaatacgggcagagccgcgtgcttctcgtctggaac
aggatcattctcccgaacggccgatccattgtgctcgaacgccagcccggcgccgatacc
cagggctatgccggtctggaagacggcgtcgattaccattggtgggacctcgccaaagcg
gcggggctctcgacgcttctgtcagtcggatccgagcttgccatcgatgaccaggaccgg
ctcctgcgcgccatccgcaatggcggccaggacacgatcaacgatgccggtcagcagatc
gttcggcgccagctcaacgtcgcgccgacactgacgatccggcccggcttccctgtccgc
gtgatcgtcacccgcgatctcgtcctcgaaccttacggaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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