KEGG   Shinella sp. HZN7: shn_31095
Entry
shn_31095         CDS       T04278                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
shz  Shinella sp. HZN7
Pathway
shz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:shz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    shn_31095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shz03400]
    shn_31095
Enzymes [BR:shz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     shn_31095
DNA repair and recombination proteins [BR:shz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     shn_31095
SSDB
Motif
Pfam: Exo_endo_phos TetR_C_31 RuBisCO_small
Other DBs
NCBI-ProteinID: ANH08592
UniProt: A0A1A9GBZ6
Position
pShin-06:34309..35091
AA seq 260 aa
MKIATYNVNGINGRLPILLRWLKEDAPDIVCLQELKSPDERFPRRELQRMGYGAVWHGQK
SWNGVAILARDATPVLTRRGLPGDPDDTHSRYIEAAVDGILIGCLYLPNGNPAPGPKFDY
KLRWFERLQTYAADLLALDLPVALIGDFNVMPTDLDVYAPERWRDDALFRPEVRKAYADL
VAQGWTDAIRHLHPKERIYTFWKYWRNSFERDAGLRIDHLLLSPALAPWLRKASVRRSPR
GWDHTSDHAPVMIEIETPSD
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgaaaattgccacctacaacgtcaacggcatcaacggccggcttcccatccttctgcga
tggctgaaagaagacgcgcccgacatcgtctgtctgcaggaactcaaatccccggacgag
cgctttccccggcgcgagcttcagcgaatgggatacggggccgtctggcacgggcagaaa
agttggaacggcgtggcgatcctcgccagggatgcgacccccgtcctgacgcgccgcggc
ctgccgggcgatccggacgacacccatagccgttatattgaggccgccgtcgacggcatc
ctgatcggctgtctgtacctgccgaacggcaatccggcgcccggtcccaaattcgactac
aagctgcgctggttcgagcggcttcagacctacgcggccgaccttctggcgctcgatctt
cccgtggcgctgatcggtgatttcaacgtcatgccgacggatctcgacgtctatgcgccg
gagcgctggcgcgacgacgcgctgttccgcccggaggtccggaaagcctatgccgatctc
gtcgcccaaggctggaccgacgccatccgccatctccatccaaaggaacggatctacacc
ttctggaaatactggcgaaactccttcgaacgcgatgcgggcctgcgcatcgaccatctt
ctcctaagcccggcgctggcgccctggttgaggaaggcgagcgtccgccgcagtccgcgc
ggctgggaccacaccagcgaccacgcgccggttatgatcgagatcgaaacgccatcagat
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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