KEGG   Streptococcus intermedius JTH08: SCIM_1280
Entry
SCIM_1280         CDS       T02156                                 
Symbol
gatC
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit C
  KO
K02435  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Organism
sie  Streptococcus intermedius JTH08
Pathway
sie00970  Aminoacyl-tRNA biosynthesis
sie01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sie00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SCIM_1280 (gatC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:sie03029]
    SCIM_1280 (gatC)
Enzymes [BR:sie01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     SCIM_1280 (gatC)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     SCIM_1280 (gatC)
Mitochondrial biogenesis [BR:sie03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SCIM_1280 (gatC)
SSDB
Motif
Pfam: GatC GatF Gta3 PUFD
Other DBs
NCBI-ProteinID: BAM23934
Position
complement(1461211..1461513)
AA seq 100 aa
MKITQEEVTHVANLSKLAFSPEETAEFATTLSKIVDMVELLNEVDTEGVPFTSNVAANIN
YMREDVAQPGWNRDELFQNVPEKERGYIKVPAILDDGGDA
NT seq 303 nt   +upstreamnt  +downstreamnt
atgaaaattactcaagaggaagtaacgcatgttgctaacttgtcaaaactcgctttttct
ccagaagaaacagcagagtttgcgacaactctgtcaaaaattgtcgacatggtcgaattg
ctcaatgaagtggatacggagggtgtgccttttacctctaatgtggctgccaatatcaac
tatatgcgagaagatgtggctcagccaggatggaatcgggacgagcttttccaaaatgta
cctgaaaaagagcggggctacatcaaagtgcctgccatcctagatgacggaggagatgcc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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