KEGG   Ruegeria pomeroyi: SPO3143
Entry
SPO3143           CDS       T00215                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
sil  Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:sil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sil03016]
    SPO3143 (truA)
Enzymes [BR:sil01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     SPO3143 (truA)
Transfer RNA biogenesis [BR:sil03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SPO3143 (truA)
 Prokaryotic type
    SPO3143 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AAV96378
UniProt: Q5LNR0
Position
3351839..3352627
AA seq 262 aa
MPRYALKVEYLGTPFAGWQRQKDLPSVQGAIETALARLEPGPHTIAAAGRTDAGVHGLGQ
VAHCDLTRDWDPFRLSEALNYHLKPQPVAITAAARVAEDWHARFSATERQYLFRLLMRRA
PATHDAGLVWQVGHRLDARAMQAAADLLLGRHDFTTFRSSICQAASPVKTLDELRVEAVE
SFSGPEIRFHVRARSFLHNQVRSFVGTLERVGAGAWAPEDVRSALEARDRAACGPVCPPQ
GLYLARVGYPEPVFAADRSAAS
NT seq 789 nt   +upstreamnt  +downstreamnt
atgccacgctatgcattgaaagtcgaatatctgggcaccccgtttgccggttggcagcgg
cagaaggacctgccctcggttcagggcgccatcgagacggccctggcgcggctggaaccg
gggccccataccatcgctgcggccggccgcaccgatgcgggggtgcatgggttgggccag
gtggcccattgcgacctgacccgcgactgggacccgttccgcctgtcggaggcgctgaac
tatcacctgaaaccgcagccggtggcgatcaccgccgccgcgcgggtggccgaggactgg
catgcccgcttttcggctaccgagagacaatatctgttccgcctgctgatgcggcgggcg
ccggcgacccatgatgccggtctggtctggcaggtcgggcaccggctggacgcgcgcgcc
atgcaggccgcggccgatctgttgctgggccggcacgatttcaccaccttccgctcgtcg
atctgccaggccgccagcccggtcaagacgctggacgaattgcgcgtcgaggcggtggag
agcttctcgggtcccgagatccggttccacgtgcgggcgcgctcgttcctgcacaatcag
gtccgcagtttcgtgggcacgctggagcgcgtgggcgcgggggcatgggcgcccgaggat
gtgcgcagtgcactggaggcacgcgaccgcgccgcctgtggaccggtctgtccgccgcag
ggcctctatctggcgcgggtgggctatcccgagccggtctttgccgccgacaggtccgcc
gcctcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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