KEGG   Sulfolobus islandicus M.16.27: M1627_1456
Entry
M1627_1456        CDS       T00900                                 
Name
(GenBank) exosome complex exonuclease 1
  KO
K11600  exosome complex component RRP41
Organism
sim  Sulfolobus islandicus M.16.27
Pathway
sim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M1627_1456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sim03019]
    M1627_1456
Messenger RNA biogenesis [BR:sim03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     M1627_1456
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     M1627_1456
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: ACP55338
UniProt: C3N5R3
Position
1406371..1407108
AA seq 245 aa
MLQVERPKLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKE
MHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRT
AIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIVLDLNEAEDM
WGEADMPVAMMPSLNQVTLFQLNGNMTPEEFRQAFDLAVKGINIIYNLEREALKSKYVEF
KEEGV
NT seq 738 nt   +upstreamnt  +downstreamnt
atgcttcaagtggagagaccaaaactaatccttgaagatggaaagcgaatagatggtaga
aagccagatgaattaaggagtataaagatagaattgggagttctcaaaaacgctgatggt
tcagcgatttttgagatgggaaatacaaaggctatagcagcggtttacggtccaaaagaa
atgcatccaagacacttatctcttccggatagggcagtattaagagttagatatcatatg
acaccattctctacagacgagcgaaagaatcccgcacctagtagaagagagattgagctt
tctaaggttataagagaagctttagaatcagctgttttagtggaattgtttccaagaact
gccatagatgtttttactgaaatattacaagcagacgcgggatccagattagtttcattg
atggctgcgtctttggcgttagctgatgctggaattcctatgagagatttaatagctggg
gtagctgtagggaaggctgatggagtaatagttctagatttaaatgaagccgaggatatg
tggggagaggctgatatgccggttgcaatgatgccttctttaaaccaggtgacgttattt
cagttaaatggtaatatgactccggaggaatttaggcaagcttttgatttagcagttaag
ggtataaatataatatataatttagagagggaggctctaaaaagtaagtatgtagagttt
aaagaagagggtgtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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