KEGG   Sphingobium indicum B90A: SIDU_05070
Entry
SIDU_05070        CDS       T04604                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
sinb  Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sinb03016]
    SIDU_05070
Enzymes [BR:sinb01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     SIDU_05070
Transfer RNA biogenesis [BR:sinb03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    SIDU_05070
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM Exonuc_VII_S
Other DBs
NCBI-ProteinID: APL93927
UniProt: A0A1L5BMD8
Position
complement(1070416..1071765)
AA seq 449 aa
MNRYDAQKTPATFHVKSFGCQMNVYDGERMAEMLGERGMTAAADGAEADLVILNTCHIRE
KAVDKVYSDIGRMTREDGSRPMIAVAGCVAQAEGGEIQRRARNVDIVVGPQAYHRLPDLI
DRAGRGEQAVDTDMPLASKFGALPSRPRQARPSAFLTIMEGCDKFCTYCVVPYTRGAEIS
RSCSAILDEAKALVDGGVGEITLLGQNVNAWTGEDDKGRMQGMDGLVRELAKIDALKRIR
YTTSHPNDMSDGLIAAHGDEAKLMPFLHLPVQSGNDRVLKAMNRSHSADSYLRIIERVRA
ARPDIALSGDFIVGFPGETDAEFEDTLKIMEQVRYAQCYSFKYSPRPGTPAADMDGQIPA
EVMDERLARLQSLINRHQAEFNAATVGRRTDILLERKGRHPGQLIGKTPWLQSVHVTAPE
LSIGDMVEVDIISAGPNSLAGQPSRRKAA
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgaatcggtacgacgcccaaaagactccagcgacattccacgtcaaatccttcggctgc
cagatgaacgtctatgatggcgagcgcatggccgaaatgctgggcgagcgcggcatgacc
gccgcggccgacggggccgaggcggatctggtcatcctcaacacctgccacatccgcgaa
aaggcggtggacaaggtctattccgacatcggccgcatgacccgcgaggacggcagccgc
ccgatgatcgcggtcgccggctgcgtcgcgcaggcggagggcggcgaaatccagcgccgc
gcccgcaatgtcgacatcgtcgtcggaccgcaggcctatcaccgcctgcccgacctgatc
gaccgggcgggtcggggcgagcaggccgtcgacaccgacatgccgctggcttccaagttc
ggcgccctgccctcgcgaccccggcaggcgcggcccagcgccttcctgacgatcatggag
ggctgcgacaaattctgcacctattgcgtggtgccctatacgcgcggcgcggagatcagc
cgaagctgctccgccatcctggacgaagcgaaggcgctggtcgacggcggcgtgggggag
atcacgctgctgggccagaacgtcaacgcctggaccggcgaggacgacaagggccggatg
cagggcatggacggcctggtccgcgaactggcgaagatcgacgcgctcaaacgcatccgc
tacaccaccagccatcccaacgacatgagcgacgggctgatcgccgcccatggcgacgag
gccaagctgatgcccttcctccatttgccggtgcaatcgggcaacgaccgggtgctgaag
gcaatgaaccgcagccacagcgccgacagctatctgcgcatcatcgaacgcgtgcgggcg
gcgcggccggacatcgcgctctccggcgacttcatcgtcggcttccccggcgagaccgac
gccgagttcgaggatacgctgaagatcatggagcaggtccgctacgcgcaatgctacagc
ttcaaatacagcccgcgtcccggcacgcccgccgccgacatggacgggcagatcccggcg
gaggtcatggacgaacggcttgcccggctccagtcgctgatcaaccgccaccaggcggaa
ttcaacgcggccaccgtcggccgccgcacggacatcctgctggagcgcaagggccgccat
cccggccagctcatcggcaagacgccctggctccagtccgtccacgtcaccgccccggaa
ctttccatcggggacatggtagaagtcgatatcatcagcgccggtccgaacagtctggcc
ggccaacccagcaggaggaaggccgcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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