KEGG   Sesamum indicum (sesame): 105160599
Entry
105160599         CDS       T04135                                 
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
sind  Sesamum indicum (sesame)
Pathway
sind04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105160599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sind04121]
    105160599
Enzymes [BR:sind01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     105160599
Ubiquitin system [BR:sind04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105160599
  Multi subunit Ring-finger type E3
   ERAD complex
    105160599
   LMBR1L-GP78-UBAC2 complex
    105160599
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 CUE zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-RING_11 zf-RING_16 zf-C3HC4_4 E3_UbLigase_EDD PHD zf-HC5HC2H RINGv Prok-RING_4
Other DBs
NCBI-GeneID: 105160599
NCBI-ProteinID: XP_011076348
UniProt: A0A6I9T0M6
Position
LG4:complement(10891235..10899719)
AA seq 574 aa
MGVNFLSISVVCTVMSLIGLQYWTDMSLEKYKSDGLIVDDFINSEDASHALELLLGSYTT
LALVASFALNVFILIILSLKTIFFSELYTSEIRKMLERLLNYVIYKGTFLPLVVPPTVFQ
AGLWSTWLGVLCFLKMFQALARDRLERLNASPSATPWTYFRVYSALLLVLSVDLLWILLC
LTIHNAASSSMFLLLFFEPLSIAFETLQAIVVHGFQLLEIWLHHSAVDGASCRLSKIFDV
SPAGSLGEWKGILIRNFGFFLDMMTMLMALAHYLHIWWLHGMAFHLVDAVLFLNIRALLS
AILKRAKGFIKLRIALGTLHGALPDATSEELRAYDDECAICREPMSKAKKLSCKHLFHLA
CLRSWLDQGLSESYSCPTCRKPLFTGRPENVVNTTAAEISRDEQLARQMSTGLDRPNLPG
HNTHPGVFNNPSQNTETGDWRRSGIDSSWLGLDGAGPSGFSRVQMVMRQLAAVGETYAQT
ALEDAAWSLFPPNSSQASTSRSAIPPAGPIRYPRDAGGLHVRSTSSVPNDNLANMIAMAE
TVREVLPHIPDDIIFQDLQRTNSVTVTVNNLLQM
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgggtgtgaacttcttgtccatttctgtggtctgtaccgttatgagcctcattggcctc
cagtattggacagatatgtcacttgaaaaatataaatcagatggtttgattgttgatgat
tttatcaattcggaggatgcaagccatgccttggagctgctattgggttcatacaccact
cttgcattggtggccagttttgcacttaatgtatttatcttgataattttaagcctgaag
acaatattcttttcagagttgtatacatctgagatacggaaaatgcttgaacggctcctt
aattatgtcatttacaagggaacttttcttcccttagtagtcccaccaacagtatttcaa
gcaggactatggtcaacttggttaggtgtgctttgtttcttgaagatgtttcaagctttg
gctagggatcgtcttgaacgattgaatgcttctccttctgctactccatggacatacttc
cgtgtatattctgcgctgttgcttgttctctctgttgacttgctctggatattgctgtgt
ctgacaatacacaatgcagcaagttcatcaatgtttctgttgttattttttgagccttta
agcattgcttttgagacgttgcaggccattgtggttcatgggtttcagttgcttgaaata
tggttgcatcactcggcagtagatggtgcaagttgccgattatcaaaaatttttgatgta
tcccctgctggttccttgggggaatggaaaggcatcctcatccggaattttggctttttc
cttgacatgatgacaatgttaatggctctagctcactatctgcacatttggtggcttcat
ggcatggcatttcatcttgttgatgctgtccttttcctgaatatccgtgcccttttaagt
gcaattttgaaacgtgctaaaggtttcatcaaactacgtatagctctgggaacccttcat
ggggcccttcctgatgctacatctgaggagctccgagcatatgatgatgagtgtgctatt
tgtagggaaccgatgtcaaaagcgaagaagctgtcttgtaaacatcttttccatcttgca
tgcttgaggtcttggttggaccagggtttaagtgagagttactcttgccccacttgtcgg
aagccacttttcacgggcagacctgagaatgtggtcaacaccacggctgcagaaatttca
agagatgagcaacttgctcgtcaaatgagtactggacttgataggccaaatcttcctggt
cataatacgcatcctggagtctttaataacccgtcacagaatacagaaactggtgattgg
aggaggagcggaattgattcaagttggttgggtttagacggagctggaccatctggattt
agtcgtgttcagatggtaatgaggcaacttgcagctgtcggagagacttatgcccagact
gcccttgaagatgctgcatggagtctgtttcctccaaactcctctcaggctagtacatcc
agatcagccatcccccctgctggtccaatacgatatcctagagatgctggtggattgcat
gtaaggtcgacatcaagtgttccaaatgacaacttagcaaatatgattgccatggctgaa
acagttcgggaggtgctgccccacatccctgatgacataatcttccaggatttgcaacgg
acaaattctgtgacggtcactgtgaataatcttttgcaaatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (17)   
   Pfam (17)   
All databases (69)   

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