KEGG   Sesamum indicum (sesame): 105163938
Entry
105163938         CDS       T04135                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
  KO
K13098  RNA-binding protein FUS
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03015  mRNA surveillance pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105163938
  09122 Translation
   03015 mRNA surveillance pathway
    105163938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105163938
Spliceosome [BR:sind03041]
 Complex A
  Other components
   Complex A specific factors
    105163938
SSDB
Motif
Pfam: RRM_1 zf-RanBP
Other DBs
NCBI-GeneID: 105163938
NCBI-ProteinID: XP_011080778
UniProt: A0A6I9TJ01
Position
LG6:7046677..7052493
AA seq 456 aa
MSGMYGQEGDGSGAPPMGGGGGYGGSEGGGYGGYGSGGAGYGGNSGGGGGYGNRGGGSGG
YGGRGGGGGGYGGNRGDRGGGYQGDRGGGYQGDRGGRGGGRGGSRGGGSGREGDWRCPNQ
SCGNLNFARRTECNKCGAPSPAGSDDRGGRGGGGYNRGGRGGSYDNNRGRGNHYDSGSGR
SGNGYDGGNGRGGSYGGNQGRDDGGYGQGPPVAPPSYGGSSGSYAPPPNAYGGNPSYAPD
AVPPPTSYTGGPASYPPSYGAPTGYGGDYLGDSRGSGRGGQTGGYGGGPRNPGGYGGSPA
EASEKVKQCDENCGDSCDNSRIYISNLPPDVTIEELRELFGSIGQVARIKQKRGYKDQWP
WSIKIYTDEQGNNKGDAVLSYEDPSAAHSAGGFFNMHDLRGYKISVSMAEKSAPKAPAYG
SGGGGRGNYGRRDNYRDGGSSGPDRNYHGGNRARPY
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtctggtatgtacggtcaagaaggtgatggatctggcgcaccgcctatgggtggaggc
ggaggttatggtggctctgaaggcggtggatacggaggttatggaagtggtggggctgga
tatggcggaaatagtggcggtggcggagggtatgggaaccggggaggtggtagtggtggc
tacggtggaagaggaggcggcgggggcggatacggcggtaatcgaggagaccgtggcggt
ggttaccaaggtgaccgtggaggtggttaccaaggagaccgtggcggacgcgggggcggc
aggggaggcagccgtggtggtggaagcggcagagaaggtgattggcgttgccctaatcaa
agctgcgggaatttgaactttgccagaagaactgagtgtaacaaatgcggtgcaccatct
ccagctggtagtgatgatcgtgggggtagaggtggtggcggttataacagaggtggaagg
ggtggtagttatgataacaatcgaggtagaggtaaccactatgatagtggcagtggtcgg
agtgggaatggttatgatggtgggaatggcagaggtggttcttatggtggtaatcaagga
agggatgatggtggttatggacagggtcctccggttgctcccccatcttatggtggttct
agtggaagttatgcaccacctcctaatgcatatggtgggaaccccagttatgcgcctgat
gcagttcctccacccacgagctatactggggggcctgcttcatatcctccatcatatggt
gctcctactggttacggtggtgattatcttggtgatagtcgtggcagtggacgaggtggt
caaactggtgggtatggtggaggtcctcgaaacccaggaggttatggtggttctccagcc
gaggcttctgaaaaagtcaagcagtgtgatgaaaattgtggggattcctgtgataactcg
agaatttatatatcaaatttgcctccagatgtcactattgaggagcttagagaacttttt
ggaagtattggccaagttgcaagaatcaaacaaaagcggggctacaaggatcaatggccc
tggagcatcaaaatatataccgatgaacaaggaaacaacaaaggagatgcagttttgtct
tatgaagatccatctgctgcacattctgctggtggttttttcaatatgcatgatttgaga
ggatacaaaattagcgtttcaatggctgagaagtctgctccaaaggctcctgcatatggt
tctggcggcggtggtagaggcaattatgggaggagagacaactacagagatggtggttct
tctggtccagatagaaattatcatggtggaaaccgtgcacggccatactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (62)   

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