KEGG   Sesamum indicum (sesame): 105166266
Entry
105166266         CDS       T04135                                 
Name
(RefSeq) THO complex subunit 5B isoform X1
  KO
K13174  THO complex subunit 5
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105166266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105166266
   03041 Spliceosome [BR:sind03041]
    105166266
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105166266
Spliceosome [BR:sind03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105166266
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 105166266
NCBI-ProteinID: XP_011083872
UniProt: A0A6I9TFE9
Position
LG7:complement(4920442..4926243)
AA seq 810 aa
MEVTMAEPGEILPERNVDMAALYDMLRSSKASAEEIVAKMLAIKKESQPKSQLRELVTRI
LLNFVTLRQANRSILLEEDRVKADTERAKAPVDLTTLQLHNLMYEKNHYVKAIKACKDFK
TKYPDIELVPEEEFLRDAPEDIKSSTLSTDSAHDLMLKRLNYELFQRKELCKLRDKLELQ
RKALEETIANRKKFLSSLPSHLKALKKASLPVQHQLGLLHTKKLKQQQLAELLPPPLYII
YSQLLAQKEAFGENIELEIAGSVKDAQAFARQLANKDSAILTNLENSKLEDDVPDEEDDG
QRRRKRPKKVLSKDNHDQSGIYQSHPLKVSLHISDDEASDLNSAKLISLKFEFLIKLNVV
CVGVEGSEEDPQNNILCNLFPDDTGLELPLQSAKLWIGNSFSFDDRRTSRPYKWVQHLAG
IDVLPEVSPLISVSGDSNSETTRHGSVLSGLSLYRQQNRVQTVVQRICARKKAQLALVEL
LDSLRKLTWPTFTCESVPWASYTPHCNLHGWLSMTSAGNSTTSLPLVDAEQSQGPTSVNA
DRNSGRSKEMETTTEDGELPSLVPVANGVNDVGLTPTKGSELENSRRLSLISKSIMSPIN
KGKSPSFKKLEEDVDLMLESDNELDEPVKVEETSDNASPLGELAFVDNSWADCGVQEYSL
VLTRRLDNDDRIMKLEAKIKISTEYPLRPPHFGLSLYSSSQGENYFVSNGSRWYNELRAM
EAEVNVHIIRMIPFDQENLILGHQVLCLAMLFDFFVDDGNPSEKRRSTSVIDVGLCKPVS
GRLVSRSFRGRDRRKMISWKDNTCTPGYPY
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggaagtgacgatggcggagcccggtgaaatactgccggagcgcaatgtagacatggcg
gcgctctacgacatgctgcggtcgagcaaggcttcggcggaagaaatcgtggccaagatg
ttggccatcaagaaagaatctcagcccaaatcccagctccgggaacttgtcactaggatt
ctcctcaatttcgtcaccctacgtcaggcaaataggtctatcttgcttgaagaagacaga
gtaaaagcagatactgaacgcgctaaagcacctgtggacctcacaaccttgcagctccat
aatttgatgtatgagaaaaatcactatgttaaagcaataaaagcttgcaaagactttaag
actaaatatcctgatattgaacttgtacccgaggaagaattcctcagagatgccccagaa
gacattaaaagctccacattatcaactgacagtgcgcatgatttgatgcttaaaaggctc
aactatgagcttttccagcgcaaagaattatgcaagcttcgtgataagttggaactacaa
agaaaagctctcgaagagacaattgctaacaggaaaaagttcttatcaagtctcccttca
cacctcaaagctctcaaaaaggcatccttgcctgtgcaacatcagttggggcttctgcat
accaagaaactaaagcagcagcaattagcagagttgctcccacctcctctctacataatc
tactctcagttacttgctcagaaggaagcgtttggagagaatattgaactggagattgca
ggaagtgtaaaggatgcacaggcttttgcgcgccagcttgcaaataaggactctgctata
ttaacaaacttagagaattccaagttggaagatgatgtgcctgatgaggaagacgatggt
caaaggaggagaaagcggccaaagaaggttctaagcaaggataaccatgaccagtctgga
atatatcaaagtcatcctcttaaagtttccctccacataagtgatgatgaagcttcggac
ttgaactcagcaaaactcatctccttgaagtttgagttcttaataaagttgaatgttgtg
tgtgtaggagtagaaggctctgaagaagatcctcaaaacaatatcttgtgcaacttattt
cctgatgacactggccttgagctccctctgcagtcagcaaagctctggattggcaattct
ttttcatttgatgataggcgaacttcacggccttacaaatgggtccagcatttggcagga
attgatgtcttgccagaggtttcgccactgatttcagtctctggagactctaatagtgag
actactagacacggttctgttctgtcaggtctgtcattatatcgtcagcagaacagagtg
cagacagttgtgcaaaggatttgtgctcgtaaaaaggctcagctggctcttgtggagtta
cttgattcgctaaggaagcttacttggcctacttttacctgtgaaagcgttccatgggct
tcatacactccacactgcaatttgcatggctggctatccatgacttcagctggtaacagt
actacatctctgccactggttgatgcagaacagagtcagggtcctacaagtgtcaatgca
gatagaaactctggtaggtccaaggagatggagaccacaacagaagatggggagcttcca
tctttggttccagttgctaatggtgtaaatgatgttggactcacccccacaaaaggatct
gaacttgagaattccagaaggctgagtttgatttcaaaaagtatcatgtccccaatcaac
aaggggaagtcaccaagttttaagaagcttgaggaggatgttgatctcatgctggaatct
gataatgagcttgatgaaccagttaaagtggaggaaacatctgataatgcatcaccattg
ggagaactagcatttgttgacaattcatgggcggactgtggggttcaagaatacagtctt
gtactaactcgtaggttggacaatgatgacaggattatgaaattggaagccaagatcaaa
ataagcacagaatatcctcttaggcctcctcattttggactgagtctttatagttcctca
caaggagagaactacttcgtgtctaatggttcgaggtggtacaatgaacttcgtgcaatg
gaggcagaggtcaatgttcacataataaggatgataccgttcgatcaagaaaatttaatt
ctaggtcatcaagtgctttgccttgcgatgctgtttgacttcttcgtggatgatgggaat
ccttctgagaagcgaaggtctacttcagtgattgatgttggtttatgcaagcctgtaagt
ggaaggcttgtcagccgatcttttagaggtcgggatcgtaggaaaatgatttcatggaaa
gacaacacctgcactcctggttatccttactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (45)   

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