KEGG   Sesamum indicum (sesame): 105169121
Entry
105169121         CDS       T04135                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105169121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sind03032]
    105169121
   03400 DNA repair and recombination proteins [BR:sind03400]
    105169121
Enzymes [BR:sind01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     105169121
DNA replication proteins [BR:sind03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    105169121
DNA repair and recombination proteins [BR:sind03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     105169121
    Bloom's syndrome complex (BTR)
     105169121
   FA (Fanconi anemia) pathway
     105169121
SSDB
Motif
Pfam: DEAD Helicase_C RQC HRDC RecQ_Zn_bind JIP_LZII DUF6026
Other DBs
NCBI-GeneID: 105169121
NCBI-ProteinID: XP_011087725
UniProt: A0A6I9TNT6
Position
LG8:17479639..17492704
AA seq 1213 aa
MMKEMHARGSNLNGDLKSSHKLHKVNWSEHANAQNNFLSQDKFLSSNFLFSLSTQKPQID
GAMAARSMVCQVQGAKMHNTQLEKAWQLLSSLQLSSRNYTKPGKSLPLSKDVNAFISQIS
RRTTKKCSSVLKSTVAESNQNYERFSGGDVKTSEPNKNLGNSFPSHIFEVEEARQVMVGQ
KGSHPLMTDGLQRQTINCVASKSKMHATAANGPKSASTDGIDEDDILENIDVDQIVLDHY
QSTPQPSISKLPPITPHTNKNNFPIPXXXKLPPELSLMCSHNCKLGFCPEASGHLQAMKD
TLIAISNDLIDNVDEMSSEKIEILRQERQQLKKQIQQLEIYLHTTSVHEERKISQFSAST
ATPMAFQYETPPTVPFRIDPTRLDFQFQANNELRGLDRWGSSSMSSYSTDGFSVSTAPLE
REPYVPKYIEINYIDGSTDKKWSSREFAWTKKLETNNKKVFGNHSFRPNQREVINATMSG
YDVFVLMPTGGGKSLTYQLPALVCPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANME
WTEQQEILRELNSDYCKYKLLYVTPEKVAKSDALLRQLERLHARESLARIVIDEAHCVSQ
WGHDFRPDYQGLGILKQKFPTIPVLALTATATMSVKEDVVQALGLVNCIVFRQSFNRPNL
RYSVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQEFGHKAAFYHGSMD
SAQRAMIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG
QPSSCVLYYSYSDYIRVKHMISQGEQTPFASGYNRGSTAPSGRLLETNTENLLRMVSYCE
NDIDCRRLLQLIHFGEKFDSLNCQKTCDNCLKNQSCVEKDVTEIAKQLVELVKITRQQFS
TAHLLEVYRGSLSQFVKKHRHETLSLHAAGKHLAKGEASRVLRHLVIEDILVEDVKKSDI
YGSVSSVVKVNESKAYNLFAGGQIIKLRFPSSVKASKSGRSEATPAKGSLTSQKQNPAQM
AEPAQQPHSEVDLNLSAKLYSSLRMLRTVLVKEAGEGVMAYHIFGNATLQQISKRIPRNK
DELLEINGIGKAKITKYGDRILETIEATIRDYYKDKNSSSSNDSTDSKRRRHATNGSNED
DFTESTGRTKKRLTKKQSQTSNSTDHACVVIDDQFEDINFDDNLFDVEVSEVDQGSGGRV
LPSWSTSENEVRS
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgatgaaggaaatgcatgccaggggaagcaacttgaatggcgatttgaaatctagccac
aaattgcataaagtgaattggtcagaacacgcaaatgcgcagaataacttcttgagccaa
gataaattcttgagttcaaacttcctcttctctttgtcaactcaaaaacctcaaattgat
ggagctatggctgcaaggtctatggtttgtcaagttcagggagctaaaatgcacaacaca
caacttgaaaaggcttggcagcttctctcaagccttcagttatcttccagaaattatacc
aaacctggaaaaagtcttcctctatccaaggatgtaaatgcattcatatctcagatttca
agacgaacaactaaaaaatgctcatccgttttgaaaagcacagttgcagaatctaatcag
aactatgaaagattcagtggaggtgatgtaaaaaccagtgaacccaataagaacttggga
aactcttttccgtcccatatttttgaggttgaggaagctagacaggttatggttgggcag
aagggttcacacccactgatgacagatggactgcaaagacaaaccatcaattgtgttgcc
agtaaatctaagatgcatgcaactgcagcaaatggtcccaagtctgcttctactgatggc
atcgatgaggacgacattcttgagaatattgatgtggaccagatagttttggatcattat
cagtcaacgcctcaaccgtcaatctctaaacttccaccaattactccacatacaaataaa
aataattttccaattcctnnnnnnnggaaattgcctcctgaattgtccttgatgtgtagt
cacaactgtaagctaggattttgtcctgaagcttcagggcacctgcaagccatgaaggat
actctaatagccatatcaaatgatcttatagacaatgtagatgagatgagttcggagaaa
atagagatccttcgtcaagaaaggcagcagctgaagaaacaaattcagcaacttgagata
tatcttcacactacatcagtccatgaggaaagaaagatttcacaattttctgcatccaca
gcaactcctatggcgtttcagtatgagacccctccaacagtgccatttagaattgatccc
acaaggcttgatttccagttccaagcaaacaatgagctgcgcgggttggatagatggggt
tcgtcatccatgtcaagttattccactgatgggtttagtgtttcaactgccccattagag
agagaaccatatgtccccaagtatattgagatcaattacatagatggttcaactgacaaa
aagtggagtagtagagaatttgcttggacaaagaagctagagacaaacaacaaaaaagtg
tttggcaaccattccttccgcccaaaccagagagaggtgatcaatgctacaatgagtgga
tatgatgtatttgttttaatgccaactggaggtggaaaaagtctgacttatcagcttcct
gcccttgtatgtcctgggataactttagtcatttcaccccttgtttcacttatccaagat
caaataatgcatctactgcaggcaaatatacctgctgcttatctaagcgccaacatggag
tggacagagcagcaggagattctcagggagcttaattcagattactgcaagtacaaactg
ttgtatgtaaccccagagaaagttgctaaaagtgatgccctactgcgtcagttggagaga
ctacatgctcgtgaatctcttgctcggattgtcattgatgaagctcattgtgtcagccaa
tggggacatgattttagaccggattaccagggtcttggtatattgaaacaaaagtttccg
actatacctgtgttggccttaactgctactgctactatgagtgtaaaggaagatgttgtg
caagctcttggtctagttaattgcattgtttttaggcaaagttttaatcgtccaaactta
agatattctgttgttcccaagactaagaagtgtgtagaagatattgacaaatttatcaga
gagaatcatttcgatgaatgtgggatcatttactgtctttctagaatggattgtgaaaaa
gttgctgaaaagttacaggaatttggacacaaagcagccttttaccatggcagcatggac
tctgctcagcgtgcaatgattcagaaacagtggagcaaggatgagatcaacataatatgt
gcaacagtagcattcgggatgggtatcaataagcctgatgttcggtttgtcattcaccat
tctcttccaaaatccattgaaggctaccatcaggagtgtggccgtgcaggtagggatggt
cagccttcatcctgtgttctgtactacagttatagtgattacattcgtgtaaagcatatg
attagtcaaggtgagcaaactccctttgcatctggatataatcgtggaagtacggcaccc
tcagggaggttattggagacaaacactgagaatctcctaaggatggttagctactgtgaa
aatgatattgattgtcgacgtctcctacagctgattcattttggagaaaaatttgattct
ctaaactgccagaaaacatgtgataattgtttgaagaatcaaagctgtgtggagaaagat
gtgactgagatagccaagcaactggttgaattggtaaagataacaagacagcagttttcg
actgcccatctcttggaggtctacagaggctccttaagccaattcgtcaagaaacacagg
catgagactttgagtttgcatgcagctggaaaacatttggccaagggtgaagcatctcgt
gtactccgtcatctggtcattgaagacattcttgttgaggatgtaaagaagagtgacata
tatggatcagtatcatcagtggtgaaggtgaatgaatccaaggcttacaatctcttcgct
ggtggccagattattaaattaagattcccttcttctgttaaagcatctaaatcaggtcgg
tcggaagccactccagcaaaaggctcactaacatcacaaaagcaaaaccctgcacagatg
gctgaaccagcccaacaaccgcactctgaagtggatttgaacctttcagccaaactatat
tcgtcattgcgaatgcttagaactgttcttgtcaaggaagctggagaaggggtgatggca
tatcacatttttggaaatgctacattacagcagatcagtaagagaatacccagaaataaa
gacgaacttctcgagattaatggtatcggcaaggcaaagattaccaaatatggagatcgt
atactggaaaccatcgaagctacaatccgggactattacaaagacaaaaacagcagcagc
agcaacgatagcaccgattcaaagaggagaagacatgccactaacggctccaatgaggat
gacttcactgagagcactggccggaccaagaaaaggttaactaagaagcagagccaaaca
tccaattcaactgatcatgcatgtgttgttatcgacgaccaatttgaggatataaacttt
gatgacaacttatttgatgtcgaagttagtgaagttgatcagggtagtggtggaagagtt
ctaccttcatggtcaacctcagaaaatgaggttcgtagttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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