KEGG   Sulfolobus islandicus L.S.2.15: LS215_1502Help
Entry
LS215_1502        CDS       T00889                                 

Definition
exosome complex RNA-binding protein Rrp42 (EC:2.7.7.56)
Orthology
K12589  
exosome complex component RRP42
Organism
sis  Sulfolobus islandicus L.S.2.15
Pathway
RNA degradation
Module
Exosome, archaea
Class
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:sis03018]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1403245..1404072
Genome map
AA seq 275 aa AA seqDB search
MSSTPSNQNIIPLIKKESIVSLFEKGTRQDGRKLTDYRPLSITLDYAKKADGSALVKLGT
TMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRD
SKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQDSNGF
RVNKNEVVGKLPLNHPVVTVSIAKVDKYLIVDPDLDEESIMDTKVSFSYTPDLKIVGIQK
SGKGSMSLQDIDQAENTARLVAVKLLEELKKQLGI
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
ttgtcttcaactccatcgaatcaaaatattatacctttaattaagaaggaaagtatagta
agtctttttgagaaaggcactaggcaagacggaagaaaattaacggattatagacctctt
tctataaccttggattatgcaaaaaaggctgatggttctgcgttagttaagttaggcacg
acaatggtattagctgggacaaaacttgaaatagataaaccttacgaagatacgcctaac
caaggaaacctcattgtgaatgttgaactcctacctttagcctatgagacctttgaacct
gggcctccagatgagaatgctattgaattagctagagtagtagatagaagtttaagggat
tctaaagctctagatctaactaaacttgtaatagaacccggtaaaagtgtatggacagta
tggcttgacgtttacgtattagactatggtgggaatgtattagatgcatgtacattggcc
tcagttgcagcattgtataatactaaagtgtataaggtagaacaagattctaatgggttt
agagtcaataaaaatgaagttgtgggtaaattaccattgaatcatccagtagttacagtg
tctatagcaaaagttgacaaatatttaatagttgatccagatttggatgaagagtcaata
atggacactaaggtttccttttcctatacgccagatctaaaaatagtggggattcaaaag
agtggaaagggcagtatgtcattacaagatattgatcaggctgagaatacagcaagatta
gtagctgtcaagcttttagaagaacttaaaaagcagttaggaatttaa

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