KEGG   Ruegeria sp. TM1040: TM1040_0164
Entry
TM1040_0164       CDS       T00359                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
sit  Ruegeria sp. TM1040
Pathway
sit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TM1040_0164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sit03400]
    TM1040_0164
DNA repair and recombination proteins [BR:sit03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TM1040_0164
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      TM1040_0164
SSDB
Motif
Pfam: Toprim_4 RecR_C RecR_HhH Toprim RecR_ZnF DZR_2 DZR DUF3626
Other DBs
NCBI-ProteinID: ABF62897
RoseoBase: TM1040_0164
UniProt: Q1GKB9
Position
complement(180902..181501)
AA seq 199 aa
MAAQDNSDIEALIALMAKLPGLGPRSARRAVLHLIRKRALVLTPLADAMSRVAETARECL
NCGNVGTSDICALCEDETRANGELCVVEDVADLWAMERAGVFKGRYHVLGGTLSALDAIG
PEDLRIPRLVDRVSTEGVSEVILALNATIDGQTTAHYIADQLSGRVKLTSLAQGVPIGGE
LDYLDDGTISAALRARKEI
NT seq 600 nt   +upstreamnt  +downstreamnt
atggctgcgcaggacaacagcgatatcgaggcattgattgcattgatggccaagctaccg
gggcttggcccccgctccgcgcgccgtgctgtgttgcacctgatccgcaagcgtgcgctt
gtcctgaccccactcgccgatgccatgagccgtgttgcagagaccgcgcgcgagtgcctc
aactgcggcaacgtgggcacgagcgacatctgcgcgctctgcgaggatgagacgcgcgcc
aatggcgaactctgcgtggtcgaggatgtggcggacctctgggcgatggagcgcgctggt
gtgttcaagggacgctatcacgtcctgggcggcacgttgtcagcacttgatgccattggc
cccgaagatctgcgcatccctcgcctcgtggatcgggtctccaccgaaggggtaagtgag
gtgatcctcgcactcaacgcgacgatcgatggccagaccacggcgcattacatcgcagat
caactgtctggacgtgtcaaactcacgtcacttgcgcagggtgtgcccatcggcggcgag
ctggactatcttgatgatggcacgatctcggctgcattgcgcgcccgcaaggaaatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system