KEGG T00359: TM1040

Ruegeria sp. TM1040: TM1040_0206

Entry

TM1040_0206 CDS T00359

Definition

tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

sit Ruegeria sp. TM1040

Pathway

sit00260	Glycine, serine and threonine metabolism
sit00400	Phenylalanine, tyrosine and tryptophan biosynthesis
sit01100	Metabolic pathways
sit01110	Biosynthesis of secondary metabolites
sit01230	Biosynthesis of amino acids

Module

sit_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:sit00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sit00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

RoseoBase:

UniProt:

Position

223721..224980

AA seq 419 aa
MAEDLINSFMNGPDENGRFGIFGGRFVSETLMPLILSLEEEYEKAKVDPDFWAEMDDLWK
NYVGRPSPLYFAERLTNHLGGAKVYMKRDELNHTGAHKVNNVLGQILLARRMGKTRIIAE
TGAGQHGVATATVCAKFGLKCVVYMGAHDVRRQAPNVFRMRLLGAEVIPVTSGRGTLKDA
MNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQSVIGKEVRWQLAEQEGEGRLPDTV
IAAIGGGSNAMGLFHPFLDDPSVNIIGVEAGGKGVDEKMEHCASLTGGRPGVLHGNRTYL
LQDDDGQILEGFSISAGLDYPGIGPEHAWLHETGRAQYVSITDKEALEAFQLSCAMEGII
PALEPSHALAHVTKIAPELPKDHIIVMNMCGRGDKDIFTVARHLGFDMSDTEEGRDLEE

NT seq 1260 nt +upstreamnt +downstreamnt
atggccgaagatctcatcaatagcttcatgaacgggccggacgaaaacggtcggtttggc
atctttggcggccgctttgtcagcgagacactgatgccgctgatcctgagcctcgaagag
gaatacgaaaaggccaaggtggatccggatttctgggcggaaatggatgatctgtggaag
aactatgtgggccgcccgagcccgctctatttcgccgagcgcctgaccaatcatctgggc
ggcgccaaggtctacatgaagcgtgacgagctcaatcacaccggcgcgcataaagtgaac
aatgtgctgggtcagatcctgctcgcccgccgcatgggcaagactaggatcatcgccgaa
accggtgctggccagcatggggttgcgaccgccactgtctgtgccaagtttggtctgaaa
tgcgtggtctacatgggcgctcatgacgtacgtcgacaggcgcccaacgtgttccggatg
cgtcttcttggcgctgaggtgatcccagtcacctctggccgtggcacgctcaaggatgcg
atgaacgacgcgctgcgggactgggtcaccaatgtgcgcgacacattctactgcatcggc
accgttgcgggcccgcacccctatccggctatggtgcgcgatttccagtccgtgatcggc
aaggaagtgcgctggcagcttgcagagcaggaaggcgagggccggttgccggacacggtg
attgcggctatcggagggggctccaacgcgatgggcctgttccacccgttcctcgatgac
ccttcggtcaatatcattggcgttgaggccggcggcaaaggtgtggatgagaaaatggag
cattgcgcctcattgacaggcggccggccgggcgtgctgcacggcaaccggacctatctg
ctgcaggacgatgacggccaaatcctcgaaggcttctcgatttcggcgggcctggattac
ccggggatcgggccggagcatgcctggctgcatgagaccgggcgcgcgcaatacgtgtcc
atcaccgacaaggaagccctcgaggcgttccagctgtcctgcgcgatggaggggattatc
ccggcgctcgagccgagccacgcgctcgctcatgtcactaagatcgcaccagaactgccc
aaggaccacatcatcgtgatgaacatgtgtgggcgtggcgacaaggacatctttaccgta
gcccgccacctcgggtttgatatgtcagacaccgaagagggccgcgacctcgaagagtga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SIT (1)   
   OC (1)   
   ROSEOBASE-SIT (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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