KEGG   Ruegeria sp. TM1040: TM1040_0222Help
Entry
TM1040_0222       CDS       T00359                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
sit  Ruegeria sp. TM1040
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:sit00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    TM1040_0222 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TM1040_0222 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    TM1040_0222 (trpA)
Enzymes [BR:sit01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     TM1040_0222 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RoseoBase: 
Position
complement(237554..238357)
Genome map
AA seq 267 aa AA seqDB search
MTRPTTRIDAKFAELAAAGKKAFVTYVMAGDPDYDTSLEVVKGLPAAGVDVIELGLPFTD
PMADGETIQLAGQRALEAGMTLERTLQLARDFRKEDDTTPIVLMGYYNPIYSRGVETFLS
DAKEAGIDGLIVVDLPPEEDSELCLPAQAAGLNFIRLATPTTDDARLPRVLQNTSGFVYY
VSITGITGAAEAEAADVGPEVARIKAATDLPIIVGFGIKTPERAQTIASISDGAVVGSAI
VAEIGAGKSPAEVLAFVKTLADGAHAG
NT seq 804 nt NT seq  +upstreamnt  +downstreamnt
atgacccgcccaaccacacgcatcgacgctaagtttgctgaactcgctgccgcgggcaaa
aaggccttcgtcacctatgtcatggcgggcgatcccgactacgacacctctttggaggtg
gtcaaaggcctgcccgccgctggcgtcgatgtgatcgagctcggcttgccctttaccgat
ccgatggcggacggcgaaaccatccagctcgcaggtcagcgcgcgctggaggccggaatg
acgctggagcgcacactgcagctggcgcgggattttcgcaaggaggatgacaccacgcca
atcgtgctgatgggctactacaacccgatctactcgcgcggtgtcgagacattcctcagc
gatgcaaaagaggccggcatcgacggtttgatcgtggtggatctgccgccagaagaagac
agcgaactctgcctgcctgcacaagcggcggggctgaacttcattcgtcttgcgaccccc
accaccgatgatgctcgtctgccacgcgtgctgcaaaacacatccggttttgtctactat
gtgtcgatcacagggatcaccggcgccgccgaggcagaggccgcggacgtcgggcccgaa
gtggctcgcatcaaggcggccacggatctgccgatcatcgtggggttcgggatcaaaacg
ccggaacgggcgcagaccatcgcttcgatctcggatggggccgtcgttggcagcgccatc
gtggccgagatcggagccgggaaatcacctgccgaggtgctggcctttgtaaaaacactg
gcggatggcgcccacgcgggctga

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