KEGG   Ruegeria sp. TM1040: TM1040_0635
Entry
TM1040_0635       CDS       T00359                                 
Name
(GenBank) aspartyl-tRNA synthetase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sit00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    TM1040_0635
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sit01007]
    TM1040_0635
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sit03016]
    TM1040_0635
   03029 Mitochondrial biogenesis [BR:sit03029]
    TM1040_0635
Enzymes [BR:sit01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     TM1040_0635
Amino acid related enzymes [BR:sit01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   TM1040_0635
Transfer RNA biogenesis [BR:sit03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    TM1040_0635
 Prokaryotic type
   Other AARSs
    TM1040_0635
Mitochondrial biogenesis [BR:sit03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    TM1040_0635
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon GAD
Other DBs
NCBI-ProteinID: ABF63368
RoseoBase: TM1040_0635
UniProt: Q1GIZ8
Position
677748..679532
AA seq 594 aa
MHAFRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA
EIEKVRSEWCIRIDGEVKARDESLVNAKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY
PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF
LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME
MSFVTQQDVFDTIAPVIAGVFEEFGQGRKVDAPNEWPQISYKDAALWYGSDKPDLRNPIK
MQVVSEHFRGSGFAIFAKLLEQEGTEIRAIPAPTGGSRKFCDRMNAFAQKEGLPGMGYIF
WREGADGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEAVAGRARNVIG
EELNLTDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALNGDPLDVRGNQY
DLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCAAG
IDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSEQLMELGLRVIPQDD
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcacgcatttcgcagccatacctgcgctgaactgaacaaatcccacgtgggcgaaacc
gttcgcctctccggctgggttcaccgggtccgcgatcacggcggccttttgttcatcgac
ctgcgcgaccactatggcgtcacgcaagtcatggccgaccccgacagccctgtgtttgcc
gagattgaaaaggtgcggtccgaatggtgtatccgcatcgatggtgaagtgaaggcacgt
gacgaaagcctcgtgaacgccaagatcccgaccggcgagattgaggttttcatccgcgac
atcgaagttctgggcaaatccgaagagctgccgctgatggttttcggcgagcaggaatac
ccggaagaaacccgcttgcgctatcgctacctcgacctgcgccgcgagaagatgcagcgc
aacatggtgctgcgctccaacatgatccgctctatccgcaatcggatgtgggatcagggt
ttcaacgaataccagacaccgatcatcaccgcgtcgagccccgaaggcgcgcgcgacttc
ctcgtgccgtcccgtctgcacccgggcaagttctacgccctgccgcaggcgccgcagcag
ttcaaacagctgatgatggtgtcgggctttgacaagtatttccagatcgcgccctgtttc
cgcgacgaggaccctcgggcggaccgctcgccgaccgatttctaccagctcgatatggaa
atgtcctttgtcacccagcaggatgtgtttgacaccatcgcgccggtgatcgcgggcgtg
ttcgaggaattcggtcagggccgcaaggtcgatgctccgaatgaatggccgcaaatttcc
tataaggacgcggccctctggtatggctccgacaagccggacctgcgcaacccgatcaaa
atgcaggtggtgtccgagcatttccgcggctctggttttgcaatctttgcaaagctcctg
gagcaggaaggcaccgaaattcgcgccattcccgcaccgacaggtggctcgcgcaagttc
tgtgaccggatgaatgcctttgcccagaaagagggcctgccgggcatgggctatatcttc
tggcgcgagggcgcggacggcatggaagccgctggacccttggcgaaaaacatcggcccc
gaacgcaccgaagcgatccgccagcagcttggtctgggtgtgggcgatgcggccttcttc
ctcgggggcaagcccaagacattcgaggcggttgcaggccgcgcgcgcaatgtgatcggc
gaagaactgaacctcaccgacaaggaccgtttcgcctttgcctggatcgtggacttcccg
atctatgaaaaggacgaagagaccggcaagatcgactttgagcacaaccccttctccatg
ccgcagggcggaatggacgcgttgaacggcgatccactcgatgtgcgcggcaaccagtat
gatctggcttgtaacggttacgagctggtctcgggcgcgatccggaaccacaagccagag
atcatgttcaaagccttcgagatcgcaggctacggcaaggaagaggtcgaaaagcgcttt
ggcggtatggtcaacgcgttccagtatggcgccccgccgcacgggggctgtgcagccggt
atcgatcgcatggtgatgcttctggcggatgaggccaacatccgcgaggtcatcatgttc
ccgatgaatcagcgcgccgaagacctgatgatggccgcaccctccgagccgatgtcggag
cagctgatggaacttggcctgcgcgtgatcccgcaggacgactga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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