KEGG   Ruegeria sp. TM1040: TM1040_1249
Entry
TM1040_1249       CDS       T00359                                 
Name
(GenBank) cysteine desulfurase
  KO
K11717  cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00450  Selenocompound metabolism
sit01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    TM1040_1249
Enzymes [BR:sit01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     TM1040_1249
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.16  selenocysteine lyase
     TM1040_1249
SSDB
Motif
Pfam: Aminotran_5 Cys_Met_Meta_PP Aminotran_1_2 DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: ABF63982
RoseoBase: TM1040_1249
UniProt: Q1GH84
Position
1342754..1343974
AA seq 406 aa
MYDVEKIRSDFPILSREVNGKPLVYLDNGASAQKPQVVIDAVTKAYAEEYSNVHRGLHYL
SNLATEKYESVRGIIAKFLNAGHEDHIVLNSGTTEGINLVAYSWAMPRMEAGDEIILSVM
EHHANIVPWHFLRERQGVVIKWIDTDADGSLDPQKVLDAITPKTKLIAVTQCSNVLGTVV
DVKSITKGAHDKGVPVLVDGSQGAVHMPVDVQDLDCDFYAVTGHKLYGPSGSGAIYIKPE
RMAEMRPFIGGGDMIKEVSKDQVIYNDPPMKFEAGTPGIVQTIGFGVALEYMMEIGMAEI
AAHEADLRDYASERFKGLNWLNIQGHAPGKAAIFSLTLEGAAHAHDISTILDKKGVAVRA
GHHCAGPLMDHLGVSATCRASFGMYNTRPEVDTLIEALELAHELFG
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgtatgatgtcgaaaaaatccgctctgactttccgatcctgtcacgcgaagtgaacgga
aagccgctggtctatctcgataacggggcctctgcgcagaaacctcaggttgtgatcgat
gccgtgaccaaggcatacgcggaagaatattcaaatgttcaccgtggcttgcattatctt
tctaatctcgcgactgagaaatacgaaagcgtacgcggcatcatcgcaaagtttttgaac
gcgggtcacgaagatcacatcgtgctgaattccggaaccacagagggtatcaacctcgtg
gcgtattcctgggccatgccgcggatggaagccggcgatgagatcatcctctccgtcatg
gagcaccatgcgaacatcgtgccctggcatttcctgcgcgaacgccaaggtgtcgtcatc
aaatggatcgacacggacgcggacggaagcctggacccgcaaaaggttctggacgccatt
acaccaaaaaccaagctgatcgcagtcacccagtgttccaatgtcttgggaaccgttgtt
gatgtaaaatccatcacaaaaggcgcgcatgacaaaggcgtgccagtgcttgtcgacggc
tctcagggcgcggttcacatgcccgtggatgtgcaggatctcgactgtgatttctatgcc
gtcaccgggcacaagctttatggtccgtctgggtccggcgcgatctatatcaagccggag
cgtatggccgagatgcgtccgtttattggcggcggcgatatgatcaaagaagtgtccaag
gatcaggtgatctacaacgatccgccgatgaagttcgaggctggtacgccagggatcgtg
cagacgatcggtttcggcgtcgcgctcgaatatatgatggagatcggaatggcagaaatt
gccgcccatgaggccgatctgcgagactatgcatcggagcgtttcaaggggttgaactgg
ttgaatattcagggccatgctcctggaaaagcagcgatattcagtctgacccttgagggc
gcggcacatgcgcatgacatttcaaccattctcgacaagaaaggtgtcgcggtgcgtgcc
gggcatcattgtgcggggcctttgatggatcatcttggcgtctctgcaacttgccgcgcg
agctttggcatgtacaacacgcgtccagaggtagatacgttgattgaggcgctagaactc
gcacatgagctttttggctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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