KEGG   Ruegeria sp. TM1040: TM1040_1500
Entry
TM1040_1500       CDS       T00359                                 
Name
(GenBank) dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil dehydrogenase (NAD+) / dihydroorotate oxidase B, catalytic subunit
  KO
K17723  dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00240  Pyrimidine metabolism
sit00410  beta-Alanine metabolism
sit00770  Pantothenate and CoA biosynthesis
sit01100  Metabolic pathways
Module
sit_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    TM1040_1500
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    TM1040_1500
  09108 Metabolism of cofactors and vitamins
   00770 Pantothenate and CoA biosynthesis
    TM1040_1500
Enzymes [BR:sit01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.1  dihydropyrimidine dehydrogenase (NAD+)
     TM1040_1500
SSDB
Motif
Pfam: DHO_dh Fer4_21 Fer4_7 Fer4 Dus Fer4_9 Fer4_22 Fer4_10 Fer4_2 Fer4_6 Fer4_4 NMO Fer4_17 Fer4_8 Fer4_18
Other DBs
NCBI-ProteinID: ABF64233
RoseoBase: TM1040_1500
UniProt: Q1GGI3
Position
complement(1606078..1607382)
AA seq 434 aa
MADLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGP
RYGAIWGADRRLLGLNNIELITDRPLDVNLEEMTRVKKDYPDRALIASIMVPCEEAAWKA
ILPRVAETGCDGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKQYYDKPVIVKLTP
NITDIRHPARAAKAGNADAVSLINTINSITSVNLDAMSPEPMIGGKGTHGGYCGPAVKPI
AMNMVAEISRDPQTAGLPISAIGGVTTWRDAAEFIALGAGNVQVCTAAMTYGFKVVEEMI
SGLSDWMDEKGYSSIEDFRGMAVPNVTDWQYLDLNYVTKAKISQDDCIKCGRCYAACEDT
SHQAIEMSADRTFTVKDDECVACNLCVNVCPVEGCITMEEVAVGAIDERTGKVVSGEYGN
WTQHPNNPSATAAE
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggctgatcttacaacagaattcctcggtatcaaatcgccgaatcctttctggctggcc
tccgcgccgcccaccgacaaagaatataacgtgcgccgcgcctttgaggcgggctggggc
ggtgtggtctggaagaccctcggcgccgaagggccaccggttgtcaacgtgaacgggccg
cggtatggcgcgatctggggggcggaccgccgtcttctggggctcaacaacatcgaactg
atcacggatcgcccgctggatgtgaacctcgaggagatgacccgcgtcaaaaaggactac
ccggatcgcgcgctgattgcgtcgatcatggtgccctgtgaagaggcggcttggaaagcg
atcctgccgcgtgtggcggaaacaggatgtgacgggatcgagctcaactttggctgcccg
catgggatggccgagcgcggcatgggttctgctgtggggcaggttccggaatacattcag
atggtcaccgaatggtgcaaacagtattatgacaagccggtgatcgtgaagctcacgccc
aatatcaccgacattcgtcatccggcgcgggccgcgaaggccggcaatgccgatgctgtg
tctctgatcaacaccatcaattcgatcacctcggtcaaccttgatgcaatgtcgcccgaa
ccgatgattggcggcaagggcacccatggcggctattgcggcccggcggtgaaaccgatc
gccatgaatatggtggccgaaatttcccgcgatccgcaaaccgcaggtctgcctatttcc
gccattggcggcgtgacaacatggcgcgatgcggcggagttcatcgctcttggggctggc
aatgtgcaggtttgcacggcggccatgacctatgggttcaaggtcgttgaagagatgatt
tcgggcctgtcggattggatggacgagaagggctattcctcgatcgaggacttccgtggc
atggcggttccgaatgtgaccgactggcagtatctggacctcaactatgtgaccaaggcc
aagatctctcaggatgactgcatcaaatgcggacgttgctatgcggcctgcgaggatacc
tcgcatcaggcgattgagatgtcggcggatcggacctttaccgtgaaggacgacgaatgc
gtggcgtgtaacctgtgcgtcaacgtctgtccggttgaaggctgtatcaccatggaagag
gttgccgtgggcgccattgatgaacgcaccggcaaggtggtgagcggcgaatatggcaac
tggacccagcaccctaataatccgtctgcaacggctgcggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (40)   

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