KEGG   Ruegeria sp. TM1040: TM1040_1562Help
Entry
TM1040_1562       CDS       T00359                                 

Definition
3-hydroxyacyl-CoA dehydrogenase
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
sit  Ruegeria sp. TM1040
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Class
Metabolism; Overview; Carbon metabolism [PATH:sit01200]
Metabolism; Overview; Fatty acid metabolism [PATH:sit01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:sit00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:sit00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:sit00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:sit01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:sit00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sit00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sit00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:sit00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:sit00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:sit00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:sit00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RoseoBase: 
UniProt: 
Position
1667347..1669548
Genome map
AA seq 733 aa AA seqDB search
MTDFKYDVDADGIAIITWDAEGKSMNVLTREAFGLVEDYIDRALGDDAVKGVVITSGKKD
FAGGMDLNVLATIREESGENPAQGLFDFTMNGHRILRKLERAGMDAKNNKGGKPIACAIN
GTCAGIGTEIALACHYRTMTDNPKAKIGLPEILLGIFPGGGGTIRYSRMVGAVNAAPVLL
EGKMMDPKKAKSASLVDEVAADPLEAARQWVLNAKDADIVKPWDQKGYKMPGGAPYHPAG
FMNFVGASAMVHGKTQGAFPAAKALLSAVYEGALVDFDTALRIEARWFTHVLMNPSSSAM
IRSLFLNKQALEKGAVRPKGIEDQSVKKIGVLGAGMMGAGIALVSAQAGMEVVLIDRDQD
AADKGKAYSATYMDKGIKRGKATPEKKEALLAQITATADLDALKGCDLIIEAVFEDPGVK
AEMTKKVEAIIPEDCIFASNTSTLPITSLAEASVRPEQFIGIHFFSPVEKMFLVEIIKGE
KTGDRAVAKALDYVRQIRKTPIVVNDARFFYCNRCIIPYINEGARMITEGVSPVLIDNAA
RQLGFPVGPIQLTDETSIDLGAKIARATKAAMGDAYPESPADDLIFWMEDQGRLGRKANA
GFFDYDDKGKRVEYWKGLAEKYPLAEVQPDLVEVQERLMFAQVLEAVRALEENVLMDIRE
GDVGAVLAWGFAPWSGGPLSWLDIIGTPYAAERCDQLAEAYGDRFACPPLLREMAEKGQT
FYGRFAPEEDQAA
NT seq 2202 nt NT seq  +upstreamnt  +downstreamnt
atgaccgatttcaaatacgacgtagacgccgatggcatcgccatcatcacatgggacgcg
gaaggcaagagcatgaacgtcctcacccgcgaggcctttggcctggtggaggactatatc
gaccgtgcgcttggcgatgacgccgtcaaaggcgtggtgatcacttccggcaagaaagac
tttgcgggcggcatggacctgaatgtgttggccaccatccgcgaggaatccggtgaaaac
ccggctcagggcctgtttgattttacgatgaatggccaccgcatcctgcgcaagctggag
cgcgcagggatggacgccaagaacaacaagggcggcaagccgattgcctgcgccatcaat
ggcacctgtgcaggcatcggcaccgagatcgcgctggcctgtcattaccgaaccatgacc
gacaacccaaaggccaagatcggcctgccggagatcctgctgggcatcttccccggtggc
ggcggtaccatccgctattcgcgcatggtgggtgccgtgaacgccgcccccgtgctgctt
gaaggcaagatgatggaccccaagaaggcgaaatccgcgagccttgtggatgaggttgcc
gccgatccgctggaagcggcgcgtcagtgggtgctcaacgccaaagacgccgatatcgtg
aagccctgggatcagaagggctacaaaatgcccggtggtgcgccctatcacccggcgggg
ttcatgaactttgtcggcgcgtctgccatggtgcatggcaagacccaaggcgccttcccg
gcggccaaggcgctgctctcggcggtctatgagggcgcattggtggattttgacaccgcg
ctgcgcatcgaggcgcgctggttcacccatgttctgatgaacccgtcgtcctctgcgatg
atccgctcgctgttcctcaacaagcaagcgctggagaaaggcgccgtgcggcccaagggc
attgaggatcagtccgtgaagaagatcggcgtgctcggcgcaggcatgatgggcgcaggc
attgcactggtttcagcgcaggcgggcatggaggtcgtactgatcgaccgcgatcaggac
gccgccgacaaaggcaaggcctactctgccacctatatggacaagggcatcaagcgcggc
aaagccacgccggagaaaaaagaggcgctgctggcgcagatcaccgcaacagcagatctc
gacgccctcaaaggctgcgatctcatcattgaggcggtgtttgaagacccgggcgtcaag
gccgagatgaccaagaaggtcgaggcgatcatccccgaggattgcatctttgcctccaac
acctcgaccctgccgatcaccagcctggccgaggcctcggtccggcccgagcagttcatc
ggcattcacttcttctctccggttgagaagatgttcctggtggagatcatcaagggtgag
aaaaccggcgatcgcgcggtggccaaggcgctggactatgtacgccagatccgcaagacg
ccgatcgtggtcaatgatgcgcgcttcttctactgcaaccgctgcatcatcccctacatc
aacgagggcgcaaggatgatcaccgaaggtgtctcgccggtgctgatcgacaacgccgcg
cgccagcttggcttcccggtggggccgatccagctgacggatgagacctcgatcgatctc
ggtgcaaagatcgcacgcgccaccaaggcggcgatgggcgacgcctatcccgaaagcccg
gcggacgatctgatcttctggatggaagatcaggggcgtctggggcgcaaggccaatgcg
ggcttctttgactatgacgacaagggcaagcgcgttgagtactggaaggggcttgcggag
aaatacccgctggcggaggttcagcccgatctggttgaggtccaggagcggctgatgttt
gcgcaggtccttgaggctgtgcgggcactggaggaaaacgtgctgatggacatccgcgag
ggtgacgtgggcgcggttctcgcctggggctttgcgccgtggtccggtggaccgctcagc
tggcttgacatcatcggcacgccctatgcagccgagcgttgtgaccaactggccgaggca
tacggcgaccgttttgcctgcccgccgctcctgcgggagatggccgaaaaaggccagacc
ttctatggccggtttgcgccggaagaggatcaagccgcctaa

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