KEGG   Ruegeria sp. TM1040: TM1040_2772
Entry
TM1040_2772       CDS       T00359                                 
Name
(GenBank) Penicillin-binding protein 1C
  KO
K05367  penicillin-binding protein 1C [EC:2.4.99.28]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00550  Peptidoglycan biosynthesis
sit01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    TM1040_2772
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sit01003]
    TM1040_2772
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sit01011]
    TM1040_2772
Enzymes [BR:sit01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     TM1040_2772
Glycosyltransferases [BR:sit01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   TM1040_2772
Peptidoglycan biosynthesis and degradation proteins [BR:sit01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   TM1040_2772
SSDB
Motif
Pfam: Transgly Transpeptidase BiPBP_C
Other DBs
NCBI-ProteinID: ABF65504
RoseoBase: TM1040_2772
UniProt: Q1GCW2
Position
complement(2923147..2925219)
AA seq 690 aa
MAGPHRRWRSPLRLPLLGLLIAAVIAGKALDQWVEDTRLPQTLAETSVEVRDRHGRLLRA
FPVEDGIWRMAVRSEEVDPTYLRMLRAYEDKRFDTHFGVDPVAMLRAFGQAVWNGRTVSG
GSTLTMQVARLLEDGPTGRWSGKLRQIRVALALERKLSKTEILNLYLIHAPFGGNLEGVR
AASLSWFGKEPHRLTAAEAALLVALPQSPETRRPDRSVSAAREARRRVLNRSQDAGVLTT
EVAHLAAVAPLPDRRRAFPLLAPHLSDQLRATAPAQARFDTTLDAMLQARLQAVLSRRVK
VSGARLSAAMIVADHQSGEILVRIGAPDYTDTARRSYVDMARAVRSPGSTLKPLVYGLAF
DDGLAHPDTLIRDAPVSFGGYAPQNFDGAFRGDVRVRDALQMSLNTPVVTLTEALGPSRL
MAAMRQVGMRPQLPSGKPGLAVSLGGVGVSLHDLVQMYAVVAAGGTAPRLTSETGAAREK
TPRVMSPVAAWYLGDILRDAPAPAGARGGMLPYKTGTSYGHRDAWAVGWDGRHVIGVWLG
RADGTPVPGVFGAELAAPVLFEAFAVLKPEIDPLSPPPSNALVLETAELPAPLQRFRARS
ETFSEAGAGAPEVLFPPTHARLSLVEGRMALKLRGGRLPFTVLANGVPVAQGLRSRDLDL
PSPGPGHATLVVIDADGQSARVTVEIEETG
NT seq 2073 nt   +upstreamnt  +downstreamnt
gtggcaggccctcacaggcgctggcgctcaccgctcaggcttccacttctgggcctgctg
attgcagcggtcattgcgggaaaagcgctggatcaatgggttgaggacacgcgcctacca
cagaccttggccgaaacttcggttgaagtgcgggaccgccatggtcggctcctgcgcgct
tttccggtagaagatggcatctggcgcatggcggtccgctctgaagaagtggaccccacg
tatctgcgcatgttgcgcgcctatgaagacaaacggttcgacacccacttcggagtagat
ccggtcgcgatgctgcgcgcctttgggcaggccgtgtggaatggacggaccgtctcgggg
ggctccactctcacgatgcaggtcgcacggttgctcgaggatgggccgaccgggcgctgg
tctggaaagctgcgccagatccgtgtcgcgctggctctggaacgcaagctctccaagacc
gagatcctcaatctctacctcattcacgcaccatttggtgggaatctcgaaggggtgcgc
gccgcaagtctttcctggtttggcaaggagccacatcgcttgaccgctgcggaagctgcg
cttctggtggcactgccgcaatcaccagagacacgccgtcctgaccgatcggtaagtgcg
gcgcgagaggcacggagacgcgtgctcaatcgcagccaagacgcaggcgtactgacgacg
gaagtggcacatctcgccgccgttgcgccgctacctgacaggcggcgggcgttccccctg
ctggcacctcatctgagcgatcaactccgcgcgacagccccggcacaggcgcggtttgac
accacattggatgcgatgcttcaggcgcggcttcaggcggtgctatcgcgcagggtcaag
gtctctggtgcacggctgagcgcagcgatgattgttgccgatcaccaaagcggggagata
ttggtgcggatcggggcgcccgattacacggataccgcgcggcggagttacgtcgatatg
gcgcgcgcggtgcgttcgccgggctctactctgaaaccgctggtctacggtctcgccttt
gacgatgggcttgcgcatcctgatacgctgatccgcgatgcgcccgtgtcctttggtggc
tacgcacctcagaactttgatggtgcatttcgcggagatgtgcgggtgcgcgacgcgttg
cagatgtctttgaacaccccggtcgtcaccttgaccgaggcgcttggaccgtcgcggctg
atggccgcaatgcggcaggtcggcatgcgaccccaactccctagcggaaagccggggctg
gcggtcagcctcggcggtgttggtgtgagtcttcatgatctggtgcaaatgtatgcggtc
gttgctgccggcggaacggcaccgaggcttacctccgagaccggagctgcgcgggaaaag
accccaagggtaatgtcgccggttgcagcttggtatcttggggacatcctgcgcgatgct
ccggcgcccgccggggcgcgcggtggtatgttgccctacaagacaggcacgtcttacggg
caccgagatgcttgggctgtgggctgggacgggcggcatgtgatcggagtctggctcgga
cgagcggacggcacgccggtgccgggtgtctttggcgcggagctggcggcaccggtgctg
ttcgaagcctttgccgttttaaaaccggagattgatcctctgtccccgcccccttcgaac
gcactggtgttggagaccgcagagctcccggcccctctgcaacggtttcgcgcccggtca
gagactttttcagaggccggcgccggggcgccagaggtgcttttcccacccacccatgcc
cggctttcgttggtggaggggcggatggcgttgaaattgcggggaggtcggttgcccttt
accgtgctggccaatggcgtgccggtggcccaaggcctgaggtcacgcgacctcgacctt
ccgagccccgggccgggccatgcaacgcttgtggtgatcgatgcagacgggcaatctgca
cgggtgaccgttgaaatcgaggagaccggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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