KEGG   Setaria italica (foxtail millet): 101752832
Entry
101752832         CDS       T02818                                 
Name
(RefSeq) spastin
  KO
K13254  spastin [EC:5.6.1.1]
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sita04131]
    101752832
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sita04812]
    101752832
Enzymes [BR:sita01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     101752832
Membrane trafficking [BR:sita04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    101752832
Cytoskeleton proteins [BR:sita04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101752832
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 Vps4_C AAA_16 AAA_22 AAA_14 TIP49 Mg_chelatase AAA_2 DUF815 AAA_25 IstB_IS21 RNA_helicase nSTAND3 Guanylate_kin TniB AAA_24 AAA_33 DUF4368
Other DBs
NCBI-GeneID: 101752832
NCBI-ProteinID: XP_004964420
UniProt: K3XWK5
Position
IV:1281553..1286751
AA seq 489 aa
MSFLRTLADTFSSLLFSSGGGAPMDAAGAAPSPAAVVGERVALKLRGYFELAKEEIDKAM
RAEEWGLPDDATAHYRNAMRVMLEAKAARVPDAVSSSERGQVRVYQEKIAKWQTQVEERL
RVLGQRSGGGAAASVVPKKVIASNLINRTAKPAPSSIQKSTLQNSPTFNRGGQASTHQRI
SSGGSKPVQKAGGSYDDKLAEMINTTIVDRSPAVKWDDVAGLDKAKQALMEMVILPTKRR
DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRT
LFMVAIERQPSVIFMDEIDSVMSTRLANENDASRRLKSEFLIQFDGVSSNPDDLVIVIGA
TNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKNQLKGQAFKLSNYDLERLAVETEGYS
GSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLKYEDFKNAMTVIRPSLQKSKWDELE
KWNEEFGSS
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgagctttctccgcacgctcgcggacacgttctcctcgctgctcttctcgtcgggaggc
ggggcgcccatggacgcggcgggggcggcgccgtcgccggctgcggtggtgggggagcgc
gtggcgttgaagctaaggggctacttcgagctcgccaaggaggagatcgacaaggccatg
cgcgccgaggagtgggggctccccgacgacgccaccgcgcactaccgcaacgcgatgcgc
gtcatgctcgaggccaaggccgcgcgggtccccgacgccgtctcctccagcgagaggggc
caggtcagggtgtaccaggagaagatcgccaagtggcagacgcaggtcgaggagcggctc
agagtgcttggccagagaagtggtggaggagctgctgcttcagtagtgccgaagaaggtt
attgcaagcaatcttattaataggacagcaaaaccagcaccaagtagcatccaaaagtct
actttgcagaatagccctaccttcaacagaggtggccaagcatctacacatcagaggatt
agcagtggaggttccaaacctgttcaaaaggctggcggaagctatgatgacaagcttgct
gaaatgattaatacaaccattgtggacagaagccccgctgttaaatgggatgatgttgct
ggtctcgacaaggcaaagcaagcactcatggaaatggttattttgcctactaaacgaagg
gatttattcaccggacttcggagacctgctaggggtttgcttctctttggtccgcctggg
aatggaaaaacgatgcttgccaaagctgttgcatcagaatctgaagcaacattttttaat
gtttcggcttcttcattgacatcaaagtgggttggagaagctgaaaagcttgtccggaca
cttttcatggttgctattgagagacaaccatctgttatttttatggatgagattgatagc
gtcatgtctacaaggttagctaatgagaatgacgctagcaggcgattgaaatctgaattc
cttatccagtttgatggggtgtcctcaaacccggatgatttagtaattgttataggggct
actaataaacctcaagagttggatgacgctgttcttcgaagactggtgaagagaatatat
gtaccactacctgatccaaatgtacggaggttacttctgaaaaatcagctcaaaggacaa
gcattcaaactgtcgaattatgatttggaaagacttgctgtggagactgaaggatattct
ggaagcgacctgagggccttgtgcgaggaagctgcaatgatgccaataagagagcttggt
ccacagaatattcttactattaaagcaaaccagttgcgacctttgaagtacgaagacttc
aagaacgcgatgactgtgatcaggccgagcttgcagaagagcaagtgggacgagctggag
aagtggaacgaggaatttggctcgagctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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