KEGG   Setaria italica (foxtail millet): 101753902
Entry
101753902         CDS       T02818                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101753902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sita03400]
    101753902
DNA repair and recombination proteins [BR:sita03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101753902
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I
Other DBs
NCBI-GeneID: 101753902
NCBI-ProteinID: XP_004962511
UniProt: K3Z3J9
Position
III:complement(31514400..31523676)
AA seq 943 aa
MDGDDFTPEGGNLPELKLDARQAQGFISFFKRLPQDPRAVRLFDRRDYYTAHGENATFIA
RTYYHTMSALRQLGSSSDGISSASVSKAMFETIARNILLERTDRTLELYEGSGSSWRLTK
SGTPGNIGSFEDILFANNDMQDSPVIVALFPVFREGQLYVGLSFLDMTNRKLGLAEFPED
SRFTNVESALVALGCKECLLPADCEKSIDLNPLQDAISNCNVLLTEKKKVDFKSRDLAQD
LGRIIRGSVEPVRDLLSQFDYALGALGALLSYAELLADDTNYGSYTIEKYNLNCYMRLDS
AAVRALNITEGKTDMNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDINEINNRLDMVQ
AIVEDPELRQGLRQQLKRISDIDRLTHSLRKKSANLQPVVKLYQSCSRISYVKGVLQQYN
GQFSTLIKTEFLDPLEEWMTENRFGRFASLVETAIDLDQLDNGEYRISPLYSSDLAVLKD
ELSVVEDHINNVHIHTASDLDLSVDKHLKLEKGPFGHVFRISKKEEQKVRKKLTSNYIII
ETRKDGVKFTSPKLKKLGDQYQALLSEYTSCQKKVVDDVVRVSGTFSEVFENFAAVLSEL
DVLQSFADLATSCPVPYVRPDITASDEGDIILQGSRHPCLEAQDGVNFIPNDCTLVRGKS
WFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCNEASVSVRDCIFARVGAGDCQLHGV
STFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFAT
HFHELTALAQRNDDEHQQVSDIGISNYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVA
EFANFPEAVIALAKSKAAELEDFSTTPTFSDDSIDEVGSKRKRVFSPDDVTRGAARAQLF
LEELAALPIDEMDQSKAMEMAAKLKVDMQKDAAGNPWLQQLLR
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggatggagacgacttcacgccggagggcggcaacctcccggagctcaagctagatgcg
aggcaagcacagggtttcatctccttcttcaagaggctgccgcaggacccccgcgccgtt
cgtctcttcgatcgcagggattattacactgctcatggtgagaatgccacgtttattgca
aggacgtactaccacacaatgtcagccttgcgtcaattaggtagcagctctgatggaatc
tcaagtgctagtgtgagcaaggctatgtttgagaccattgcccgcaacattttattggag
cggactgaccgtacattggagctctatgagggaagtgggtcgagttggaggttaacaaag
tctggaacacctggaaatattggtagttttgaagacattctgtttgcaaataacgacatg
caagattcaccagtcattgttgctttgtttccagttttccgggaaggtcagctgtatgta
gggcttagttttctggatatgaccaacaggaagcttgggttagctgagttccctgaagat
agccgattcacaaatgttgaatcagcacttgttgcattaggttgcaaggagtgtcttctc
ccagcggattgtgaaaaatccattgatttgaacccccttcaagatgccattagtaattgt
aatgttctattgactgaaaaaaagaaggttgacttcaaatccagggatcttgcacaagat
cttggtagaataatcaggggttctgttgaacctgttcgtgacctgctatctcagtttgac
tatgctcttggtgcccttggagctctgttatcttatgccgagttgctagcagatgatact
aactatggaagttacacaattgagaagtacaatctgaactgctacatgagacttgattct
gctgcggtgcgagcattaaacatcacagaagggaaaactgatatgaacaagaacttcagt
ttgtttggtttgatgaacagaacctgtactgttgggatgggaaagagattgcttaacaga
tggctgaaacaacctctattagatataaatgaaatcaataacagattagatatggttcag
gctatcgtagaagatccagagcttcgtcagggactcaggcaacaacttaaaaggatatca
gatattgatcgtctaacacattctctccgaaagaaatcagctaatctgcagcctgttgtt
aagctttaccagtcttgttccagaatctcatacgtcaagggtgttcttcagcaatacaat
ggccaattttccacattgataaagacagagtttcttgacccattggaagaatggatgaca
gagaatcgatttggtaggtttgcttctcttgttgagacagctattgaccttgatcagctg
gacaatggagagtacagaatatctccattatattcttctgacttagctgtgctgaaggat
gagctttctgttgttgaagatcacataaataatgtgcacattcatacagctagtgatctg
gatctttctgttgataagcatctgaagctagaaaaaggaccatttggacatgtgttcaga
atctcaaagaaagaggagcagaaagtcaggaagaaactcactagcaactacataatcata
gaaactcgtaaagatggtgtgaagttcactagtccgaagctgaaaaagctaggtgatcaa
taccaggcactgcttagtgagtacacaagttgtcagaaaaaggttgttgatgatgtagtg
agggtttcaggcaccttctcagaggtatttgaaaattttgctgcggttctgtcagagttg
gatgttttacaaagttttgctgatttggcaactagttgcccagttccttatgtaaggcca
gacattacagcatcggatgaaggagatattattctacaaggtagcagacatccttgtctg
gaagcacaagatggcgttaactttatacccaatgattgcactctggtaagagggaaaagt
tggtttcagatcatcactgggccaaacatgggaggaaaatccacgtttataagacaggtt
ggtgtaaacgtcctgatggcacaagttggttcatttgttccttgcaatgaagcaagtgtt
agtgtgagagattgtatttttgctcgtgttggtgctggtgattgtcaacttcatggtgta
tcaacctttatgcaagagatgcttgaaacagcatccatcctgaaaggcgcctctgataag
tctcttataattattgatgagctgggacgtggaacttccacatatgatggatttggtctc
gcatgggctatctgtgagcatctagtggaagtgactcgagcacctaccttgtttgcaacc
catttccatgaattaactgcattagcacagagaaatgatgatgagcatcaacaagtttct
gatatcggaatttcaaattatcacgtgggtgctcacatagacccatcaagtcggaagtta
actatgctctacaaggttgaacctggggcatgtgaccaaagttttggtattcacgttgca
gaatttgctaattttccagaagctgttattgctcttgcaaaaagcaaagcagcagagtta
gaagacttttctactacacccaccttttctgatgattcgatagacgaggttgggtcaaag
cgcaagagggtatttagcccagatgacgtgaccagaggggctgctcgggctcagcttttc
ctggaggaactcgcagcattgcctatagatgagatggatcagagcaaggccatggagatg
gctgccaaactgaaagttgacatgcagaaagatgcagctggcaatccttggcttcagcag
ttactgaggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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