KEGG   Setaria italica (foxtail millet): 101766144
Entry
101766144         CDS       T02818                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
  KO
K12897  transformer-2 protein
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101766144
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sita01009]
    101766144
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101766144
Protein phosphatases and associated proteins [BR:sita01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101766144
Spliceosome [BR:sita03041]
 Common components
  Common spliceosomal components
   SR proteins
    101766144
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 101766144
NCBI-ProteinID: XP_004973345
UniProt: K3YLP6
Position
VI:23649817..23654502
AA seq 283 aa
MSQAKEVRYTARSITPPAERNGTSSSPPPKRRSPSRSPPPKSTSRSPHPRSPKRRSTSRS
PPPRRRGRSRSRSRDRSRSRSLDDRNPGNNLYVTGLSTRVTEDDLEKFFSKEGKVKNCHV
VLDPRSKESRGFAFVTMDTVEDARRCIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG
RRGGSQRSPSPHRSRRRERSRSRDRKRERSRSRDRRERSRSRERRRERSRSRDRRERSRS
RDRRRERSRSRDRRKERSHSRDSQRRRGDRSRSLAGNGNHKTD
NT seq 852 nt   +upstreamnt  +downstreamnt
atgtcacaagccaaggaagtgagatacaccgcacggtctattacacctcctgcagaaaga
aatggaacttcaagttcgcctcctccaaagaggcgcagcccttcaaggtcgcctccccca
aagagtacctcaaggtctccacatccaaggagtcctaagcggcggagcacttcaaggtct
cctcctcctaggagacgtggtagatcgaggtcaaggtcaagggataggagtcgatccagg
agcctagatgatagaaatccagggaataacctttatgtgactggattgtctactcgtgta
actgaagatgaccttgagaagttttttagtaaagaaggaaaggttaaaaactgtcatgtt
gttcttgatcctcgctcaaaagaatcccgtggctttgcctttgtgactatggatactgtt
gaagatgcaagacgctgcatcaagtacctgcaccgcactgtgcttgaaggtcgtctggtc
actgtagagaaggctaaaaggactcgagaaaggactcctactcctggaaaatactgcggt
cgaagaggaggatctcaaaggagcccatcacctcaccgttctcgcagaagggagcgatcc
cgctcaagggaccgtaaaagggagcgttctcgctcacgggatcggagggaacggtctcgc
tcaagggaacgcagaagggaaaggtcccgctcaagggatcgaagggaacggtctcgctca
cgggaccgccgaagggaacgctcacgctcacgggaccgcaggaaggaacgctcacactca
agggactctcagagaaggcgtggagatcggtccaggtcactggcaggcaatgggaaccac
aagacagactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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