KEGG   Setaria italica (foxtail millet): 101766173
Entry
101766173         CDS       T02818                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101766173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sita03021]
    101766173
   03019 Messenger RNA biogenesis [BR:sita03019]
    101766173
Enzymes [BR:sita01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     101766173
Transcription machinery [BR:sita03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101766173
Messenger RNA biogenesis [BR:sita03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101766173
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 101766173
NCBI-ProteinID: XP_004977281
UniProt: K3YA48
Position
VII:33433529..33436715
AA seq 199 aa
MVAEGKRWRFAMVCSSNMNRSMEAHSQLGRAGLDVESYGTGTHVKLPGPSLHEPNVYDFG
TPYGAIYDDLRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDMIMTFEERVF
DLVVEDMNNREPKLMKSVPIINMDVKDNHEEAGVGAKLAVELCQKLEAIDGDWEEIIDDL
ITGFEKQHKRRLAYSIAFY
NT seq 600 nt   +upstreamnt  +downstreamnt
atggtggcggagggcaagaggtggcggttcgcgatggtgtgctcgtcgaacatgaaccga
agcatggaggcgcactcgcagctgggccgcgcggggctcgacgtcgagtcctacggcacc
ggcacccacgtcaagctccccggcccctccctccacgagcccaacgtctacgacttcggc
accccctacggcgccatctacgacgacctccgccgcaaggaccctgatctgtacaagagg
aatgggctgctgccaatgctgaagaggaacacctcagtgaagctggcacctcagcggtgg
caggacaatgccggtgatgggttgtttgatatgataatgacctttgaggagagggtcttc
gacttggttgttgaagatatgaataaccgcgagccaaagctgatgaagagtgtgccgata
atcaatatggatgtcaaagataaccatgaagaagctggtgttggggcaaagcttgctgta
gagttgtgccagaagcttgaagcaattgatggtgactgggaggaaattatcgatgacctg
attactggattcgagaagcagcacaagcggaggcttgcatacagcattgcgttctactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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