KEGG   Setaria italica (foxtail millet): 101770247
Entry
101770247         CDS       T02818                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101770247
Spliceosome [BR:sita03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    101770247
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    101770247
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 101770247
NCBI-ProteinID: XP_004960688
UniProt: K3Z3Z3
Position
III:complement(5448986..5454396)
AA seq 793 aa
MAASASPAASPPRRRHSHRDDESPRRRKRRASPSPPRSPSPGADADRRRRSRASPPDPDR
RRGDRDAKPSEEKENGHAKPGRDAEVYDRPPRRARVSDGEEDGDRRRRRARVSDDEKEDG
RRRRRARDSDEEREDRRGKRDRERDSRRHRRRSASSESGSSPDDRRRRRHRRDEGSRRRD
DRRRRDDDRGERRRSPEKKEPTPPLPPPPPLLPEMIPGRTGGIYIPPFRMAQMMREVEDK
SSPEYQRLTWDALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMASP
GFTDVFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQVVA
HELVALELLTVLLENPTDDSVEVAAGFVKECGAMLQDLSPQGLHAIFERFRGILHEGEID
KRVQFLIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDLDPETNLNVFRANP
NFVEDEKAYENLKRSILGAESSEDEEGSDAASDDEEEEESDEEEDEEEMEIRDRTETNLV
NLRRTIYLTIMSSVDFEEAGHKLMKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQR
FCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEE
DTTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQGSFESIFPKDHPKNTRFSINFFTS
IGLGGITESLREYLKNMPRLIMQQQKPESSESESSGSESGSESSGSGSSSESESESSSDE
SERRRSKKRRKRT
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggccgcctccgcctctcccgccgcctccccaccgcgtcgccgccacagccaccgcgac
gacgaatccccgcgccgccgcaagcggcgcgcgtccccgtccccaccccgctctccatcc
cccggcgccgacgcggaccgccgccgcagatctagggcttcaccgcccgaccccgaccgc
cgccgcggcgaccgcgacgccaagccctccgaggagaaggagaatggtcacgccaagccc
ggaagggacgcggaggtctacgaccgtcctccccggcgcgctagggtttcggatggggag
gaggatggcgaccgccggagaaggcgggctagggtttccgacgacgagaaggaggatggc
cgccggcggaggcgggctagggattcggatgaggagagggaggaccgccgcggcaagcgc
gaccgggagagggacagccggcgccaccgccgccgcagcgccagctcggagtcgggatcc
tcacccgatgaccgccgccggcgccgccaccgccgagatgagggctcgaggcggcgggat
gaccgaagacgcagggatgacgaccgtggggagcgtcggaggagccctgagaagaaggaa
ccgacgccaccccttcccccacctccgccgctgctgccggagatgatccctgggcgcacg
ggtgggatttacatcccaccattccgcatggcgcagatgatgcgggaggtggaggacaag
tcgagccctgagtaccagcggctcacctgggatgctctcaagaagagcatcaatgggctg
gtgaataaggtcaatgcgaccaatatcaagaatatagtgccggagctctttgcggagaac
cttgttcgtgggcgggggctcttctgccaatcgtgcatcaagtcacagatggcctcacct
gggttcaccgatgtttttgctgcacttgtcgcggttgtgaataccaagtttcctgagatt
gggcggttgcttcttgttcgtgttgtgctccagctcaagagggcatacaagcgaaatgac
aagccccaattgcttgcagcaaccaagttcatagcacacctggtaaatcaggtggtggca
catgagcttgtagcgctggagcttcttacggtactccttgaaaatccaactgatgatagt
gttgaggtggctgctgggtttgtcaaagagtgtggggccatgctacaggacctatctcca
caaggtcttcatgctatttttgaaagatttcggggcatacttcatgaaggagaaatagac
aagagagtacaatttttgattgaaggcctttttgcaattagaaaggctaaatttcaggga
ttccctgccatccgaccagagttggatcttgtggagcaggaggaccagtttacacatgag
atatcccttgaagatgacctagaccctgagaccaacctaaatgttttcagggcaaatcca
aattttgttgaagatgagaaggcctatgagaacctaaagagaagcatcctgggagcagaa
tcttctgaagatgaagaaggatcagatgccgcttctgatgatgaggaagaggaagaatct
gatgaagaagaggacgaggaagagatggagataagggatagaacagagacaaatcttgtg
aatctaagaagaactatatatttgactattatgtccagtgttgattttgaagaagctggt
cacaagcttatgaaaattaaacttgagcctggtcaagagatggagctgtgtattatgctg
cttgagtgttgcagtcaagagaggacatatcttcggtattatgggctgctaggacagcgg
ttttgcatgatcaacaaagtgtaccaagagaactttgaaaaatgttttgtgcaacaatat
tcgatgattcatcgccttgaaacgaacaagttgaggaatgttgccaagttctttgcacat
ttgttggggactgatgcactcccttggcacgttttggcttacatccggctgacagaggaa
gacacaacatcctcttctcggattttcataaaaattctattccaggagttatcggagcac
ctgggcatacgcctactcaatgagagacttaatgatcctaacatgcaaggttccttcgag
tcaatcttccccaaggatcatccaaagaatacaaggttctccatcaatttcttcacctcc
attggtcttggtggtatcacggagagcctgagggagtacttgaagaacatgccgcgcctc
ataatgcagcagcagaagccggaatcatctgaatcagaatcaagcggatcagaatctggt
tcagaaagctccggctcagggtccagttctgagtccgagtcggaatcaagctctgatgag
agtgaaaggaggcgaagtaagaagagaaggaagaggacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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