KEGG   Setaria italica (foxtail millet): 101777072
Entry
101777072         CDS       T02818                                 
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
  KO
K14780  ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sita03009]
    101777072
Enzymes [BR:sita01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     101777072
Ribosome biogenesis [BR:sita03009]
 Eukaryotic type
  90S particles
   Helicases
    101777072
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C DEAD HA2_N HA2_C AAA_22 ATPase nSTAND3 PhoH AAA_19 TNP-like_GBD
Other DBs
NCBI-GeneID: 101777072
NCBI-ProteinID: XP_004953853
Position
I:37393541..37399521
AA seq 1286 aa
MEDSNALILPCKRKNKGQGKAKDGKKAKEDPKMSKTKLKKLQKLEEEKRKKLLQAQSIDI
LQKHKISEDAYSLLHASGTIGQVETLKEKRRRAMQLSKAGLDVPEELSLFKRNGDQKFSE
NSDPVEHILPPKFVEPVKSEDPGRLHEKNMKNDPRKAMECQPKMDVGVSIPEPKTEEPSD
NGHLLANQKIQSSIPSCSGSELNLQDKEPGQGEAAMQECINPPIVVPVSRPHEVEKARRD
LPIIMMEQEIMEAIYENSIVILCGETGCGKTTQVPQFLYEAGFGTSDRADRRGMIGITQP
RRVAVLATARRVSYELGLKLGREVGFQVRHDKLVGSNCSIKFMTDGILLRELQGDFLLKR
YSVIILDEAHERSLNTDILIGMLSRIIKGRKNLYVDQQDKIRSGVKIKPEDMISQLKVVL
MSATLQLKDFISNRRLFDVIPPAVKVPVRQFPVTVHFSKRTHDDYLGLAYKKVMSIHNRL
PPGGILVFVTGQREVDYLCKKFRRASKVQTAKKPEKVDGDDNGPFPEVDDKEIFEAYDID
RNKSEHPDDIFSSYHDDDDMDPGPNSFSSDNETESELDTDTDDEESFTYETTEEDAPVLS
FLKDAENSSVLKASFGALSGISGVPESVEKSSDATSEEKSSPSVSCFGKCTERMPVSHGR
LRVLPLYAMLPASQQLQVFQDIPKGERLVVVATNVAETSLTIPGIKYVVDTGKEKVKNYD
HATGMSSYEVQWISKASASQRAGRAGRTGPGHCYRLYSAAAYGKDDLFPEFAEPEIKKIP
VEGIVLMLKFMGIHKVVNFPFPTPPNKESLVEAERCLKALEALYSHDDYDGKLTPMGKAM
AQYPMSPRHSRLLLTVIKILKSQQGFARSNFILGYAAAAASALSFTNPFLKQLDESDING
ESEEHNTNPEANDPCERKRRKKHNAMVREAQEKFSNPSSDALTIARALQFFELSENPVEF
CRINSLHLKTMEEMSKLRKQLLRLIFHHSKFCKEFAWNSGDSDDVEQAWRNESSKRPLQM
NEEELLGQGICAGWADRVARRNHTYSRASGDDRKVRAIRYQSCALNDTIYLHRSSSVAQV
APELVVYSELLSTKRLYMHGVTTIKPGWLLKYASSLCTFSAPLEDPKPYYDPVNDQVYCY
VSPVFSRHNWQLPLHSLPIKDNTSRLQVFVCALLKGDVLPCLRNAKDFLALSPSFVFGPA
SQRRVGDLLDRMHIKQKSKIGKKLIDSRAALRDAWNADPNFLYPEIKAWYQDKFHSQFDL
KWEQMHQEVLLEGHELFPKRSKKVKG
NT seq 3861 nt   +upstreamnt  +downstreamnt
atggaggatagcaacgccctgattttgccctgcaagaggaagaacaaggggcaggggaaa
gccaaggacggtaagaaagccaaggaggacccaaagatgagcaagactaagctaaaaaag
ctgcagaaattggaggaggaaaagcgaaagaagctgctgcaggctcaaagcattgatatt
ttgcagaagcacaagatctcagaagatgcatattcactgctgcatgcttcagggactatt
ggtcaagttgagactttgaaagaaaaacgtaggcgtgccatgcagttgtccaaggctggt
ttggatgttccggaagaactctcgctattcaagagaaatggtgatcagaaattttctgaa
aacagtgaccccgtggagcacattttgccacccaagtttgttgagcctgtaaaaagtgag
gatcctggtaggttacatgagaaaaacatgaagaatgatccaaggaaagctatggaatgc
caaccaaagatggatgttggagtaagcattccagagcccaaaactgaggagcctagtgat
aacggccacctgttggcaaatcagaaaattcagtcttcaattccaagttgctctggatca
gagctaaatttgcaggataaagagccaggacaaggggaagctgccatgcaggagtgcata
aatcctccaattgttgtgcctgtgtcaagaccgcatgaggttgagaaggcaaggagagat
ctcccaataataatgatggagcaggaaataatggaagctatttatgaaaattctatagta
atcctttgtggagaaacaggctgcggtaaaactactcaggtccctcagttcctgtatgaa
gctggctttggcacaagtgatcgagctgacagaagagggatgattgggatcacccaacca
cgacgtgtcgctgtccttgccacagctaggagggtgtcctatgagttaggacttaagctg
gggagggaagttggttttcaagttcggcatgacaaattggtgggaagtaattgctccatc
aagttcatgacagatggtattttgctgcgagagctccagggtgattttctgttgaagcgc
tattcggtgatcatattggatgaggcacatgaaaggagcttgaacacagatatacttatt
gggatgctttctagaattattaagggtcgcaagaatttatatgtagatcagcaggataaa
atacgatctggagtgaaaatcaagccagaagatatgatcagtcagttgaaagtggtgctc
atgagtgctactctacaattgaaggacttcatttctaataggagattgtttgatgtgatc
ccaccagctgttaaggtacctgtgcggcagtttccagtaacagttcacttctcaaagagg
acacatgatgattatttagggctagcttataaaaaggttatgtcaatccacaataggctt
ccaccaggtggaatccttgtatttgtcactggacaacgagaagtggactacttgtgtaag
aaattccgaagagcgtccaaggtgcaaactgctaagaagcctgaaaaagttgatggcgat
gataatggtccgttcccagaagtagatgataaggaaatttttgaagcatatgatatagat
aggaacaaatctgagcacccagatgacatattttcttcatatcatgatgatgatgatatg
gatcctgggccaaattctttttcttctgacaatgaaacagaaagcgaattggatactgac
actgacgatgaagagtcttttacatatgaaaccacggaagaggatgctccagtattatca
tttttgaaagacgctgagaactcatctgtgttgaaggcgtcatttggagctctgtcagga
atatcaggagtgccggaaagtgttgagaaatcaagtgatgctacaagtgaagaaaagtct
agtccctctgttagttgtttcggtaaatgtacagaacgtatgcctgtatcgcatggcaga
ctccgtgtcttgccactttatgcaatgttaccagcttcacagcagcttcaagtgtttcaa
gatatccctaagggggaaagattagttgtggtggcaactaatgtcgcagaaacctcttta
acaattcccggcataaaatatgtagttgatactgggaaagaaaaggttaagaattacgac
catgctactgggatgtcaagttatgaagtccaatggataagcaaggcatcggcatcccag
cgtgctggaagagctggaagaacagggcctgggcactgttaccgtctctactcagctgca
gcatatggtaaagacgatttatttcctgaattcgctgaacctgagatcaagaaaattcca
gttgaaggcattgtccttatgctcaagtttatgggtatccataaggttgtgaactttcct
ttccctactcctccaaacaaggaaagtttggttgaagctgagcgttgcttaaaggcattg
gaagcactttatagccatgatgattatgatggaaaacttacaccaatgggaaaggctatg
gcacaataccccatgagcccacgacattctcgtcttcttctgacagtgattaagattttg
aagagccagcaaggctttgctagatctaacttcatactgggatatgctgctgctgctgca
tcagcgttgagttttactaatccatttctcaagcagttggatgaaagtgatattaatggc
gaatcggaagaacataacactaatccagaagctaatgatccatgtgaaaggaaaagacgg
aagaagcacaatgccatggttagagaggcacaggaaaaattttctaaccctagcagtgat
gctttaaccattgcccgtgccctacaattttttgagttgtcagaaaaccctgtggaattc
tgcagaataaattcacttcatctcaaaacaatggaagagatgtcaaaattgagaaagcaa
cttctccgtttaatatttcaccacagcaaattttgcaaggaatttgcttggaattctgga
gattctgatgatgttgagcaggcctggaggaatgagtccagtaaaagaccattgcaaatg
aatgaagaggaacttcttgggcaaggaatctgtgctggatgggctgatagagttgcaagg
agaaatcacacctattccagagcatcaggagatgatcgtaaggttcgagctattcgttat
caatcttgcgcgcttaatgataccatatatctgcaccgatcatcgtctgttgcccaagtt
gccccagagcttgtagtttactcagagctacttagtacaaagaggttatacatgcatggt
gtaaccactataaagccagggtggcttttaaagtatgccagttctctatgcaccttctct
gcgccattggaagatccgaaaccctattatgaccccgtgaatgaccaagtctattgttat
gttagtccagtcttttctcgacataattggcagcttcccttgcatagtttacctatcaaa
gacaacaccagtcgcctgcaggtatttgtgtgtgctttgcttaagggggatgtcttgcca
tgtctaaggaatgcgaaagatttcctggcactgtcaccatcttttgtcttcgggcctgcc
agccaaagaagagttggagatcttcttgacaggatgcatattaaacaaaaatcaaagatt
ggtaaaaaattaattgacagccgagcagcactgagagatgcatggaatgctgatccaaat
tttctctatcctgagataaaggcgtggtaccaggataaattccatagccagtttgactta
aaatgggagcagatgcaccaagaggttcttcttgaggggcatgagcttttcccaaagagg
tccaagaaagttaaaggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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