KEGG   Setaria italica (foxtail millet): 101778368
Entry
101778368         CDS       T02818                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101778368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sita03021]
    101778368
   03036 Chromosome and associated proteins [BR:sita03036]
    101778368
Transcription machinery [BR:sita03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101778368
   Coactivators
    SAGA/TFTC/STAGA complex
     101778368
Chromosome and associated proteins [BR:sita03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     101778368
    STAGA complex
     101778368
    TFTC complex
     101778368
    SAGA complex
     101778368
    SLIK complex
     101778368
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF LptF_LptG
Other DBs
NCBI-GeneID: 101778368
NCBI-ProteinID: XP_022685619
Position
IX:complement(24761..29238)
AA seq 502 aa
MDAPLPSQPEAAAAAPPPSTSASAPSPAPPPNPPTSAASAAPSSDSTITTHTPNPGTATN
PAQTLEAPVPSPAAARPPPPRMRPPYTHLASPITMSSASSAATAAASSSASVLSSSSLAP
PVPRGGVVIGVPAPRPAQTPAGYTGFVPPPSLAHQFGSMHRGLDQPPPPSSQFRQPSPGI
QNIGMVGSLSTSQMRSGIISGPQQPRPGLPSSTTPIPSGSQMPGSQRTPSHALMRPMSVS
SPSPSPALQQTPQNSSTFRPQQRPQVPQPRPQQSAPVTPHQQNVISAQQQQLPHNQLLQQ
QQQKQQQQSSSQQTQQNTTPKNQQQHSQQQAARTPVTMTQKPDSPAIAKATVLQSVDTAA
TDANVSETGTRLLNKRSIHELVAQIDPNEKLDPEVEDVLMDIAEDFVESVTTFACSLAKH
RKSNTLEAKDVLLHAERSWNITLPGFSGDEIKLYKKQHINDIHRERLALIKKSMATDXQK
NSTQAATNQKNQTPKPPAPASP
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggacgcacctctgccctcgcaaccggaggcagcggcagcggcgccgccgccctcgacc
tcagcttctgctccctctccagcgccaccacctaacccaccgacttccgccgcctctgca
gcaccctcttccgactccaccatcaccacccataccccgaacccgggtaccgcaacaaac
cccgctcaaactctagaggcccctgttcccagccccgctgctgcgcggccgccgccgccg
cgaatgaggcctccttacacccacctggcctcgccaatcacgatgtcctcagcctcctct
gctgccacagctgctgcctcctcctcggcttccgttctgtcctcttcctccttggcaccc
cctgtgccaaggggaggggttgttattggggtgcctgcgccgcgtcccgcacagacgccc
gctggttacaccgggttcgtgccgccgccttcccttgcccaccagtttggatcgatgcat
cgtggccttgaccagcccccaccgccatcttcacagtttaggcagccttcccctggaatt
caaaatattgggatggttggatcccttagcacatcccagatgcgatcaggaataatatct
ggtccgcagcagccaagacctggccttccatcatcaacaactccaattccatctggaagc
caaatgcccggatcacagagaaccccctcccatgctttaatgaggccgatgtctgtgagt
tctccttctccttcccctgcgttacagcaaactccacaaaattcatcaacatttagaccg
caacaaaggccacaagttccacaaccaagaccacaacaatctgcacctgtgactccacat
caacagaatgtaatttcagcacagcagcagcaactaccacacaatcagcttttgcagcag
cagcagcaaaagcaacagcagcaaagttcctcgcaacaaactcaacagaatacaacaccc
aaaaatcagcaacagcattctcagcagcaagctgctcgtactccagtgacaatgacacag
aagcctgattcgcctgctatagcaaaagctactgttttgcaatctgtggatacagctgca
actgatgcaaatgttagtgaaactggcactcgactactcaacaagagaagcatacatgaa
ttagttgcacagattgatcctaacgaaaagctggatcctgaagttgaagatgttcttatg
gacatcgctgaagattttgttgagtctgtcactacatttgcttgttctttagcaaagcat
aggaagtcaaacaccctagaagcaaaagatgtactcctccatgcagagagaagctggaat
atcaccttgccaggcttcagcggggacgaaatcaaactatacaagaaacagcacataaat
gatattcacagggagaggcttgctctgatcaagaagtcaatggcgactgacnnacaaaaa
aactccacccaagctgcaacgaaccagaaaaatcagactcccaaaccacctgcccctgct
tccccgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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