KEGG T04514: BSY16

Sinorhizobium sp. RAC02: BSY16_3176

Entry

BSY16_3176        CDS       T04514

Symbol

gidA

Name

(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

K03495

tRNA uridine 5-carboxymethylaminomethyl modification enzyme

Organism

six Sinorhizobium sp. RAC02

Brite

KEGG Orthology (KO) [BR:six00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:six03016]
    BSY16_3176 (gidA)
   03036 Chromosome and associated proteins [BR:six03036]
    BSY16_3176 (gidA)
Transfer RNA biogenesis [BR:six03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    BSY16_3176 (gidA)
Prokaryotic type
    BSY16_3176 (gidA)
Chromosome and associated proteins [BR:six03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    BSY16_3176 (gidA)

SSDB

Motif

Pfam:

GIDA GIDA_C GIDA_C_1st Pyr_redox_2 FAD_oxidored FAD_binding_2 Pyr_redox HI0933_like AlaDh_PNT_C Pyr_redox_3 NAD_binding_9 Thi4 FAD_binding_3

Other DBs

NCBI-ProteinID:

AOF89024

Position

3272165..3274054

AA seq 629 aa
MTSINSYDVIVVGGGHAGVEAAAAAARFGAKTALVTHKATTIGTMSCNPAIGGLGKGHLV
REVDALDGLMGRVADHAGIQFRLLNRKKGPAVRGPRTQADRKLYLQAMQAEISGISGLDV
IEGDAFDLAFSDGQLEALIMKDGRRLACRAVVITTGTFLRGLIHIGSEKIPAGRVGEDPS
IGLSATFEQLGLSLGRLKTGTPARLDGRTIRWDVVGRQAADEDPVPFSFMTDRITTPQIE
CGVTRTTPATHRIIEENIGKSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEG
LDDHTVYPNGISTSLPADVQEAFIRTIPGLEEVTILQPGYAIEYDHVDPRELSASLEVRR
QPGLFLAGQINGTTGYEEAAAQGLVAGLNAARRAAGHDGHVFSRTDSYIGVMIDDLTSRG
VTEPYRMFTSRAEYRLSLRADNADARLTPLGIDLGIVAKPRRDRFAQWCGDMQTARDRLQ
TLRLSPNEAAVHGIKINFDGVRRSAYDLLAYPDINFRDLAAIWPDDLAEFVPRVRDAIEI
EATYAVYMNRQETDIAEARREEERRIPDDFDFSTLPGLSIELRQKLAAARPSNLSQASRV
DGMTPAALTLLLAYLKRLPADAVQKAASI

NT seq 1890 nt +upstreamnt +downstreamnt
atgacaagtataaacagctatgatgtcatcgtcgtcggtggcggccacgctggcgtcgag
gccgcggccgcggcggcacggtttggtgccaagacggcattggtcacgcacaaagcgacg
actattggcactatgtcctgtaatcctgcgatcggtggtctcggcaaaggtcacctcgtt
cgcgaagtcgacgccctagacgggctgatgggccgtgtcgcggatcacgccggtattcag
tttcgactgctgaatcgcaaaaaagggcctgcggtgcgtggaccgcgcacgcaggctgac
aggaagctctaccttcaggcaatgcaggccgagatttctggtatttccggcctggacgtc
attgagggtgacgccttcgacctggcgttctctgatggacagctcgaagccctgatcatg
aaggatggacgccggcttgcatgccgcgctgtggtcatcacgacgggcacgtttttgcgc
ggccttattcatatcggcagcgaaaagattccggctggccgcgttggtgaagacccatcg
attgggctttccgcgaccttcgaacagcttggcctctccttggggcggttgaagaccggc
acgccggcgcgcctggatggacggacgatccggtgggatgtcgtcggccgtcaggctgcc
gatgaagatccggtgccgttttccttcatgacggatcgcatcacgacgccgcagattgaa
tgtggcgtgacacgcacgacaccggcgacccaccgcatcatcgaagaaaacatcggcaag
tccgccatgtattccgggcagatcgagggtgtgggaccgcgatactgcccctcgatcgaa
gacaagattgtccggttcggggagcgggatgggcaccagatctttctggagccagaaggt
ctcgacgatcacactgtctatcccaacggcatttccacttcgctgcccgccgacgtgcag
gaagcgttcatccgaacgattccgggtttggaggaggtgacaatcctgcaacccggctat
gcgatcgaatacgatcacgtcgatccacgggaactgtcggcgagcctggaagtcaggcgc
caaccgggcctcttcctcgcggggcagatcaacggcacgaccggttacgaagaggccgct
gcacaagggctggttgcgggtctcaacgccgcgcgtcgtgcagcgggtcacgatggccat
gtcttcagccggaccgacagctatatcggcgtgatgatcgatgacctgacatcgcgtggc
gtcactgaaccgtaccggatgttcacctcccgtgcggaataccgactgtccttgcgggcg
gataacgccgatgcccgactgacaccactcggtattgacctcggcatcgtcgccaaaccg
cgccgggatcgttttgcccaatggtgtggcgacatgcagaccgcgcgagacaggttgcag
acgctgcggctatcgccgaatgaggcggcagtacacggcatcaagatcaatttcgacggt
gtccgtcgaagcgcttatgacctgcttgcctatcccgacatcaactttagagatctggcg
gcaatctggccggacgacctggcagagtttgtgccgcgggttcgggatgcgatcgaaatc
gaggccacctacgccgtctatatgaataggcaggagacggacattgccgaggcgcgccgc
gaagaggaacgccgaattccggacgactttgatttcagcacgctgccgggcctatcgatc
gagcttcgtcagaagcttgccgcggcgcgcccgtcaaacctttcccaggcgtcgcgcgtc
gatggtatgacaccagcggcactgacccttctcctcgcatatctgaagcgtctaccggcg
gacgcagtgcaaaaggctgcctctatatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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