KEGG   Shewanella japonica: SJ2017_2237
Entry
SJ2017_2237       CDS       T04959                                 
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
sja  Shewanella japonica
Pathway
sja00300  Lysine biosynthesis
sja01100  Metabolic pathways
sja01120  Microbial metabolism in diverse environments
sja01230  Biosynthesis of amino acids
Module
sja_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sja00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SJ2017_2237
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sja01002]
    SJ2017_2237
Enzymes [BR:sja01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     SJ2017_2237
Peptidases and inhibitors [BR:sja01002]
 Metallo peptidases
  Family M20
   SJ2017_2237
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28 Peptidase_M18
Other DBs
NCBI-ProteinID: ARD22528
Position
2685512..2686642
AA seq 376 aa
MTQDVLELTKDLLARPSVTPLDEGCQTLMADRLSAVGFNIESMVFEDTTNMWARKGIKSP
VFCFAGHTDVVPTGDLNKWHTPPFEPTVIDDYVHGRGAADMKGSLAAMVIATERFLAKHP
DHNGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWSLVGEPSSTHKLGDVVKNGRRG
SLTGNLTVKGIQGHVAYPHLADNPIHKASPALAELAQMHWDNGNEFFPPTSFQIANINGG
TGASNVIPGDLQVMFNFRYSTEVTADELIKRVLNILDAHGLDYDIDWVFNGLPFLTGDGP
LLDATKDAIFEVTGYETDPQTSGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKISDL
ELLAKCYESILEKLLC
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgacccaggacgtacttgagctaactaaagatttactcgcacgcccgtcagtaacccca
cttgatgaaggctgtcaaactttgatggccgataggttatctgctgttggtttcaacatt
gaatcaatggtatttgaagacaccaccaacatgtgggcaagaaaaggcattaaaagcccc
gttttttgttttgctggacacactgatgttgttcccacaggcgatttaaacaaatggcac
actccaccatttgaaccaactgtcatcgatgattatgttcatggtcgcggcgcagccgat
atgaaaggatcattagcagctatggttattgctacagaacgctttctggcaaaacaccca
gatcataatggctctatagcttttttaattaccagcgacgaagaaggcccatttattaat
ggtacaactcgtgtcattgatacccttgaagctcgtaatgaaaaaattacttggtcactg
gttggtgagccttcatcgactcataagttaggtgatgtggttaaaaacggtcgtcgtggt
agtttaaccggtaatttaacggtgaaagggattcaaggacacgttgcctaccctcacctt
gctgataaccctattcataaagcctcaccagcacttgctgaactcgcgcaaatgcattgg
gataacggtaatgaatttttcccaccaaccagtttccaaatagcaaatattaacggtggt
acaggcgcatctaatgttatccctggtgatttacaggtaatgtttaacttcagatactca
actgaagtcacagccgatgaattaatcaaacgtgtactaaacatacttgatgcccatggg
ctcgattatgatattgattgggtatttaatggtcttcctttccttactggcgatggccca
ttgctggacgcaacgaaagacgccatttttgaagtcacaggctatgaaaccgacccgcaa
acttcaggtggcacgtcagatggccgattcatcgcccccactggtgctcaagttattgaa
ttaggcccggtaaatgcgacaattcataaagtgaatgagtgtgtaaaaatctcagatctt
gaactattggccaaatgttacgagtctattctggaaaagctcctttgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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