KEGG   Shewanella japonica: SJ2017_2403
Entry
SJ2017_2403       CDS       T04959                                 
Name
(GenBank) arginine decarboxylase
  KO
K01585  arginine decarboxylase [EC:4.1.1.19]
Organism
sja  Shewanella japonica
Pathway
sja00330  Arginine and proline metabolism
sja01100  Metabolic pathways
sja01110  Biosynthesis of secondary metabolites
Module
sja_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:sja00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    SJ2017_2403
Enzymes [BR:sja01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.19  arginine decarboxylase
     SJ2017_2403
SSDB
Motif
Pfam: Orn_Arg_deC_N Arg_decarb_HB Arg_decarbox_C
Other DBs
NCBI-ProteinID: ARD22693
Position
complement(2857810..2859723)
AA seq 637 aa
MKDWSIENARASYNVTHWSQQYFGIDDSGEVTVTPDPNKPECTIGLNELAKDMVKAGVAL
PVLVRFPQILHRRVENLCDAFNAAIQKYEYQNDYLLVYPIKVNQQQTVVEEILASQKSKE
VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYVRLALIGEKLGHKVYIVIEKIS
ELKLILEESKNLGVTPRLGIRTRLAFQGKGKWQASGGEKSKFGLSAAQVLKVLNELEELN
MMSSLQLIHFHLGSQIANIRDIRQGVSEAGRFYCELRKMGALIDTFDVGGGLAVDYDGTR
SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTES
YKPEDIQPPEEDAPQLLHNMWMSWTDMSERPDNRAIIEIYHDTQSDIAEAHSLFSVGQLT
LMQRAWAEQTNLRVCHALKSLLSNNNRYHRPIIDELNEKLADKFFVNFSLFQSIPDAWGI
DQVFPVLPLSGLDKPPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWTPESPYLIG
FFMVGAYQEILGDMHNLFGDTNSAVVRVEESGIPNIESVLAGDTVADVLRYVNLDAVAFM
RTYEELVNQHIAEDERTSILEELQLGLKGYTYLEDFS
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgaaagattggtctatcgaaaatgctcgtgcaagttataacgtgacacattggagtcaa
cagtattttggtattgatgatagtggcgaggtgacagtaacccctgatccgaataaacca
gaatgcactatcggattaaatgagctggctaaagatatggttaaagctggggttgcttta
ccggttttagtgcgtttcccacaaattttacatcgcagagttgaaaacttatgtgatgcc
tttaatgcggcgattcaaaaatacgagtatcaaaatgattacttgttagtgtatccgatt
aaagtaaaccaacagcaaaccgttgttgaagagattttggctagccaaaagtcaaaggaa
gtgccacaactagggctggaagcaggtagtaagcctgagttaatggccgtacttgctatg
gcgcaaaaagccagctcagttatcgtttgtaacggttacaaagataaagagtatgtgcgt
ttagcactcatcggtgaaaagcttggtcataaagtttacatcgtcatcgagaaaatctct
gagctaaagttgattcttgaagaatctaaaaatttgggggtgacgccaagactgggtatc
cgcactagacttgcttttcaaggcaaaggtaagtggcaagccagcggtggagaaaaatca
aagtttggtttatctgcagcgcaagtgcttaaggtgcttaatgaattagaagagctcaat
atgatgagttcgctgcaattaattcatttccacttgggttcgcaaatcgccaatattaga
gatattcgccaaggtgtaagtgaagctggccgcttttactgtgagttgcgtaaaatgggc
gcacttatcgatacctttgatgtgggcggcggcttagctgtagattatgacggtactcga
agtcaaagtaataactcgatgaattatggtttgactgaatacgccaataatatcgtcaat
gtgttaactgatatttgtaatgaatatgagcagccaatgccacgtattatttctgagtcg
ggtcgtcacttaacagcgcatcacgcggtgttaatcactgacgttattggcactgaatca
tacaagcctgaggacattcaaccgcccgaggaagatgcgccgcagctacttcataatatg
tggatgtcttggactgatatgagtgagcgtcctgataatcgggctattattgagatttat
catgatactcaaagcgatattgctgaagcgcactcgttattttctgtcgggcaactgaca
ttaatgcaacgtgcttgggctgagcaaactaacttgcgtgtttgtcatgctcttaagagt
ttgttgagtaataataaccgttatcacagacccattattgatgagttgaatgaaaagtta
gcggataagttctttgttaacttctctttatttcaatctattcccgatgcatgggggatt
gatcaagtattccctgttctgccattgagcggacttgataagccaccagaaagacgggct
gtgatgttagatattacctgtgactcggatggtattgttgatcaatatgtagacggtcaa
ggtattgagactacgttacctgttcctgcttggacacctgaaagcccttatttgatcggc
tttttcatggttggtgcttatcaagagattttaggtgatatgcacaatttatttggtgat
accaactctgctgtcgttagggttgaagaaagcggtattccaaatattgagtctgttctt
gctggtgatacagttgctgatgtacttcgctatgtgaatttagacgccgttgcgtttatg
cgaacttatgaagaattggtcaatcagcatattgctgaggatgaaagaacatcaatacta
gaagagttacagttaggtcttaaaggttatacctatttagaagatttttcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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