KEGG T01201: SJA

Sphingobium japonicum: SJA_C1-20640

Entry

SJA_C1-20640 CDS T01201

Gene name

pdhC

Definition

pyruvate dehydrogenase E2 component (EC:2.3.1.12)

Orthology

K00627

pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]

Organism

sjp Sphingobium japonicum

Pathway

sjp00010	Glycolysis / Gluconeogenesis
sjp00020	Citrate cycle (TCA cycle)
sjp00620	Pyruvate metabolism
sjp01100	Metabolic pathways
sjp01110	Biosynthesis of secondary metabolites
sjp01120	Microbial metabolism in diverse environments

Module

sjp_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:sjp00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sjp00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sjp00620]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding Biotin_lipoyl_2 HlyD_2 RnfC_N HlyD HlyD_3 NQRA Neisseria_TspB

Other DBs

NCBI-GI:

NCBI-GeneID:

NITE:

UniProt:

Position

1:complement(2058023..2059306)

AA seq 427 aa
MSKTIQMPALSPTMEEGTLAKWLVKEGDTVSSGDLLAEIETDKATMEFEAVDEGTVAKIL
VAEGSEGVKVGTVIAIIAEEGEDLSQAAAGNAAPSAAAPAAGPAPQADPVPAKAPAPAPK
ADPAPAKATDGRVKASPLARRLAEAKGLDLAAVTGSGPNGRIVKADLEGAAPVAKTAVPA
AAPAAPLAAAPAAAQDFGIPHEVIKLSGMRKTIARRLTESKQQVPHIYLTVDVQLDKLLK
LRGELNAGLASRGVKLSVNDLLIKALGVALIQVPECNVQFAGDQMLKFQRADISVAVSIP
GGLITPIVTEADSKGVAAISTAMKDLAARAKDGKLKPEEYQGGTASLSNMGMFGIKQFEA
VINPPQGMILAIGAGEKRPFVIDDSLQIATVMSATGSFDHRAIDGADGARLMQVFKELVE
NPIGMLA

NT seq 1284 nt +upstreamnt +downstreamnt
atgagcaaaacgatccagatgcccgccctttctccaacgatggaagaagggacgctggcg
aaatggctggtgaaggagggcgacaccgtctcctccggcgatctgctggcggagatcgag
accgacaaggcgacgatggaattcgaagccgtagacgaaggcaccgtggccaagatactg
gtggccgaagggtcggagggggtgaaggtgggcaccgtcatcgccatcatcgcggaggag
ggcgaggatctgtcgcaagccgccgccggtaatgccgctcccagcgcagcggcccccgca
gcaggccctgcgccccaggccgatccggtgcccgccaaggccccggcgcccgcgccgaag
gccgatcccgcgccggccaaggcgacggacggcagggtgaaggccagcccgctcgcccgt
cgcctggccgaagccaaggggctggatcttgccgccgtcaccggctccggtcccaatggc
cgcatcgtgaaagccgacctggagggcgccgcgcccgtcgccaagactgccgttccggcc
gccgcgcctgccgctccgctcgccgccgcgcctgccgccgcgcaggatttcggcatcccg
cacgaggtcatcaagctcagcggcatgcgcaagaccatcgcgcgccgcctgaccgaatcc
aagcagcaggtgccgcacatctacctgaccgtggacgtgcagctcgacaagctgctgaaa
ctgcgcggcgaactgaatgcgggcctggcctcgcggggcgtcaagctgtcggtcaacgac
ctgctgatcaaggcgctgggcgtggcgctgatccaggtgccggaatgcaacgtccagttc
gctggcgaccagatgctgaaattccagcgagcggacatttcggtggccgtgtccatcccc
ggcggcctcatcacccccatcgtgacggaggcggacagcaagggcgtcgccgccatctcc
accgcgatgaaggatctcgccgcccgcgccaaggacggcaagctaaagccggaggaatat
cagggcggcaccgcctcgctctccaacatgggcatgttcggcatcaagcagttcgaggcc
gtcatcaacccgcctcagggcatgatcctggccatcggcgcgggcgagaagcggcccttc
gtcatcgatgactcgctccagatcgcgaccgtcatgtccgccaccggcagtttcgaccac
cgcgccatcgacggcgctgacggcgcccgcctgatgcaggtcttcaaggaactggtcgaa
aatccgatcgggatgctcgcctga

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

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