KEGG T01201: SJA

Sphingobium japonicum: SJA_C1-24320

Entry

SJA_C1-24320 CDS T01201

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sjp Sphingobium japonicum

Pathway

sjp00020	Citrate cycle (TCA cycle)
sjp00310	Lysine degradation
sjp00380	Tryptophan metabolism
sjp01100	Metabolic pathways
sjp01110	Biosynthesis of secondary metabolites
sjp01120	Microbial metabolism in diverse environments

Module

sjp_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sjp_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sjp00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sjp00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sjp00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

NITE:

UniProt:

Position

1:complement(2449948..2452758)

AA seq 936 aa
MGYENQEVFDGVGDIEHGPSWARTNWPPIDTDDLTGALDPTQMQVAVKAAAKANGKAVSD
ADAVSAADDAIRAQMLIRTYRVRGHLAANLDPLGLTQRDLPADLTPEYHGLNDLDKKVYL
GGTLGLQYATVREIVAILRANYCGNVGLEYMHIADVEERRFLQERLEGKDKEIHFTPEGK
RAILAKVIHAEQYEKFLGRKYVGTKRFGLDGGESMIPALEAIIKYGGAQGVREIVYGMAH
RGRLNVLANVMAKGFRVIFHEFSGGTANPEDVGGSGDVKYHLGTSTDREFDGVKVHMSLV
PNPSHLETVDPVVLGKVRAQQTFRDDLTRHEQVLPVLIHGDAAFAGQGIVWECLGFSGVS
GYNTGGCIHFIVNNQIGFTTSPQFSRGSPYPSDVAKGVQAPILHINGDDPEAVTFACKLA
MEYRQTFHRDIVIDMWCYRRFGHNEGDEPSFTQPQMYAKIRQHPPVSDVYSARLKAEGVV
DDAFVNQVTGDFVNHLEEEFEAAKSYKPNKADWFAGRWSGLHKPADAETTRQSVESAISQ
KLFDSLGKTLTAIPEGLNVHKTLKRVIDAKAEMFKSGENFDWATGEALAFGSLLSEGYGV
RLSGQDSGRGTFSQRHAVWTDQDTESKYVPLSTVPHGRFEVLDSPLSEYGVLGFEYGFAL
ADPKSLVLWEAQFGDFANGAQIIFDQYIASSETKWLRSNGLVCLLPHGYEGQGPEHSSAR
LERYLQLCAEGNIQVANITTPANYFHVLRRQMLRPFRKPLIIMAPKSLLRHKLAVSKAED
FLGETHFKRILSDPNGAADKDTRRLVLCSGKVFYDLMEARDAAGDTDVQIVRIEQIYPFA
TDALAKRIERMTHLEEVVWCQEEPRNNGAWFFVEPYIEEALATAGKAPMRARYAGRKASA
SPATGLAKRHVAEQGALVADALGHSVREEIRRQKKG

NT seq 2811 nt +upstreamnt +downstreamnt
atgggttacgagaaccaggaagtttttgacggcgttggggacatcgagcacggaccgagc
tgggcgcgcaccaactggccgccgatcgacaccgacgacctgaccggggcgctggacccc
acgcagatgcaggtggccgtgaaggccgccgccaaggccaatggcaaggcggtttccgac
gccgacgccgtcagcgccgccgacgacgcgatccgcgcccagatgctgatccgcacctat
cgcgtgcgcggtcatctggccgccaatctcgacccgctggggctgacccagcgcgacctg
ccggccgacctgacgccggaatatcatggcctgaacgacctcgacaagaaggtctatctg
ggcggcacgctgggcctgcaatatgccaccgtgcgcgagatcgtggcgatcctgcgcgcc
aattattgcggcaatgtcggcctggaatatatgcacattgcggacgtggaggaacgccgt
ttcctccaggagcgcctggagggcaaggacaaggaaatccacttcacgccggaaggcaag
agggcgatcctggccaaggtgatccacgccgagcaatatgagaagttcctgggccgcaaa
tatgtcggcaccaagcgcttcggcctggacggcggcgaatcgatgatccccgcgctggaa
gccatcatcaaatatggcggcgcgcagggcgttcgcgagatcgtctacggcatggcccat
cgcggccgcctgaacgtgctggccaatgtgatggccaagggcttccgcgtcatcttccac
gaattttccggcggcaccgccaatccggaggatgtcggcggttcaggcgacgtgaaatat
cacctcggcacctcgaccgaccgcgagttcgacggcgtcaaggtccatatgtcgctggtc
cccaacccgtcgcacctcgaaaccgtcgatccggtggtgttgggcaaggtccgcgcgcag
cagaccttccgcgacgacctgaccaggcatgagcaggtgctgcccgtgctgatccatggc
gacgcggccttcgcggggcagggcatcgtctgggaatgcctcggcttttccggcgtcagc
ggctacaataccggcggctgcatccacttcatcgtcaacaaccagatcggcttcaccacc
agcccgcaattctcccgcggctcgccctatcccagcgacgtggcgaagggcgtgcaggcg
ccgatcctgcacatcaatggcgacgatccggaagccgtcaccttcgcgtgcaagctggcg
atggaatatcgccagaccttccatcgcgacatcgtgatcgacatgtggtgctatcgccgc
ttcggccataatgaaggcgacgaaccgtccttcacccagccgcaaatgtacgcgaagatc
cgccagcatccgccggtcagcgacgtctattcggcgcggctgaaggccgaaggcgtcgtc
gacgacgccttcgtcaatcaggtgacgggcgatttcgtcaatcatctggaggaagagttc
gaggcggccaagagctacaagcccaacaaggcggactggttcgccggccgctggtcgggc
ctacacaagcccgccgacgccgagaccacccgccagagcgtggagtccgcgatcagccag
aagctgtttgacagcctgggcaagacgctgaccgcgattccggagggcctcaacgtccac
aagacgctcaagcgcgtgatcgacgccaaggcggagatgttcaagtccggcgagaatttc
gactgggcgaccggcgaggccctggctttcggatcgctgctgtcggagggctatggcgtc
cgcctgtcgggtcaggactccggacgcggcaccttcagccagcgtcacgccgtctggacc
gaccaggatacggaatcgaaatatgtcccgctctccaccgtgccgcacggccggttcgag
gtgctggactcgccgctctccgaatatggcgtgctgggcttcgaatatggcttcgcgctg
gccgatcccaagagcctcgtgctctgggaagcgcagttcggcgacttcgccaatggcgcg
cagatcatcttcgaccagtatatcgcgtcgtcggagaccaagtggctgcggtccaacggt
ctcgtctgcctgctgccgcacggctatgaaggccagggtccggaacatagctcggcgcgt
ctggagcggtatctccagctttgcgcggaaggaaatatccaggtcgcgaacatcacgacc
ccggccaattacttccatgtcctgcgtcgccagatgctgcggcccttccgcaagccgctg
atcatcatggcccccaagtcgttgctgcgccacaagctggcggtcagcaaggcggaggac
ttcctgggcgaaacgcacttcaagcgcatcctgtcggaccccaatggggcagccgacaag
gatacccgccgcctggtgctctgctccggcaaggtcttctacgacctgatggaggcccgc
gacgcggctggcgacacggacgtgcagatcgttcgcatcgaacagatctatccgttcgcg
accgacgccctcgccaagcgcatagagcgcatgacgcatctggaagaggtcgtctggtgt
caggaggaaccgcgcaacaacggcgcctggttcttcgtggagccctatatcgaggaagcg
ctggccaccgccggcaaggcgccgatgcgcgcccgctatgcgggccgcaaggcgtcggcg
tcgcccgccacgggccttgccaagcgccatgtcgccgaacagggcgccctcgtcgccgat
gcgctgggtcacagcgtgcgtgaagaaatccgtcgccagaagaaaggctga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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