KEGG T01201: SJA

Sphingobium japonicum: SJA_C1-27880

Entry

SJA_C1-27880 CDS T01201

Gene name

ddlA

Definition

D-alanine-D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

sjp Sphingobium japonicum

Pathway

sjp00473	D-Alanine metabolism
sjp00550	Peptidoglycan biosynthesis
sjp01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:sjp00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:sjp00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 ATPgrasp_TupA

Other DBs

NCBI-GI:

NCBI-GeneID:

NITE:

UniProt:

Position

1:complement(2792374..2793339)

AA seq 321 aa
MTRGPWHVAVLMGGWSAERPVSLSSGEGVAKALESRGHRVTRIDMDRDVALRLSETRPDV
VFNALHGVPGEDGTVQGMMDLMGFTYTHSGLATSVIAIDKQLTKQALVPHGIPMPGGHIV
PSESLFEGDPLPRPYVVKPVNEGSSVGVAIVTEGGNYGSPIGRDVEGPWLHFEELLAEPY
IRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTEHVCPADIPPEIGEACKAIAL
RAHQLLGCKGASRSDFRWDDEQGIEGLFLLEVNTQPGMTPLSLVPEQAARLGIDYAELVE
RIVEDALNGARIAANGGAKHG

NT seq 966 nt +upstreamnt +downstreamnt
atgacccgtggcccctggcatgtagccgtcctgatgggcggctggtccgccgagcggccg
gtttcgctctcgtcgggcgagggcgtcgccaaggcgctggaatcgcgcggccacagggtc
acgcgcatcgacatggaccgcgacgtcgcgctgcggctctccgaaacccgacccgatgtc
gtgttcaacgccctccacggcgttccgggcgaggatggcacggtccagggcatgatggac
ctgatgggcttcacctacacccattcgggcctcgccacctcggtcatcgccatcgacaag
cagctcaccaagcaggcgctggttccccatggcatccccatgcccggcggtcatatcgtc
cccagcgaaagcctgttcgagggcgatccgctgccgcgtccctatgtggtgaagccggtc
aatgagggcagttcggtcggcgtcgccatcgtgacggaggggggcaattacggttcgccc
atcggccgcgatgtcgaggggccgtggctgcatttcgaggaactgttggccgaaccctat
attcgcgggcgggaactgaccaccgccgtgctcggcgacgaagcgctgctggtgacggaa
ttgcgtcccaaaagcggcttctacgatttcgacgccaaatataccgatggcatgaccgag
catgtctgccccgccgatattccgccggagatcggcgaagcctgcaaggccatcgcgctg
cgcgcgcaccagttgctggggtgcaagggcgcttcgcgctccgatttccgttgggatgac
gagcagggcatcgaggggctgttcctgctggaagtgaacacccagccgggcatgacgccg
ctcagcctggtccccgaacaggcggccaggctgggcattgactatgccgaactggtggag
cgtatagtcgaggacgcgctgaacggcgcccgaattgcagccaatgggggggcgaagcat
ggctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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