KEGG   Sanguibacter keddieii: Sked_20220
Entry
Sked_20220        CDS       T01214                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ske  Sanguibacter keddieii
Pathway
ske03030  DNA replication
ske03410  Base excision repair
ske03420  Nucleotide excision repair
ske03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ske00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sked_20220
   03410 Base excision repair
    Sked_20220
   03420 Nucleotide excision repair
    Sked_20220
   03440 Homologous recombination
    Sked_20220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ske03032]
    Sked_20220
   03400 DNA repair and recombination proteins [BR:ske03400]
    Sked_20220
Enzymes [BR:ske01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sked_20220
DNA replication proteins [BR:ske03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Sked_20220
DNA repair and recombination proteins [BR:ske03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Sked_20220
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Sked_20220
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_pol_lambd_f HHH_5 DprA_N HHH
Other DBs
NCBI-ProteinID: ACZ21946
UniProt: D1BHM6
Position
complement(2254534..2257239)
AA seq 901 aa
MRDRFAGVTDTSRPRLLLIDGHSMAYRAFFALPVDKFSTTSGQHTNAVHGFISMLATLLR
VEEPTHVAVAFDAGSTTFRTEALPSYKGTRDATPEPFKGQVPLIKEVLEAMHVRHLDKDN
FEADDILATLSSQADALGMEVLVCSGDRDSLQFVNENVTVLYPVKGVSELARMTPDAVRT
KYGVEPHQYPELAALVGETSDNLPGVPGVGPKTAAKWINQFGSLEQILDRAGEIKGKAGE
SLRDHLDVVRLNRQLNHLLTDVELPFGPDDLRVQPWDREAMSTVFDALQFRTLRERLFAM
HPSADDDENAAPAVEVTVEDLAPGLLEAWFAEHDQRPLGLEVAGRPVPAGGDAWALAIAD
GPGSAVALDLTDLSAADDTALSDWLSDPTRAKVVHGGKSVWHELASRGYSLEGVVFDTEL
AAYLCFPDQRSYDLGDLAERHLHRELTPVDTSSDQGALDLSVGEDSEGGRLAVRAAALTD
LAEVLRGELGDRSAEPLLTELELPLSAVLVHMERHGIAMDVDYLRELEQHFGELVTGAAA
SAYEVIGREVNLGSPKQLQEVLFDQLDMPKTKKIKTGYTTDAAALADLFVKTEHPFLKFL
LDHRDSTRLRQTVEGLLKSVADDGRIHTTFQQTIAATGRLSSTEPNLQNIPIRTEAGRRI
RRAFVVGDGYETLLTADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHNYVGSRVFQVETSA
VTPAMRSKIKAMSYGLAYGLSSFGLSNQLNIDVKEASKLMEDYFTRFGGVRTYLAGVVDE
ARANGYTATIMGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLGVEKEIA
VRGLRSRLLLQVHDELILEVGHGELEELTTLVREQMGSAADLLVPLDVSVGTGSSWHDAG
H
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgagagataggtttgcaggtgtgaccgacacttcgcgacccaggctcctgctgatcgat
ggccactccatggcgtaccgggcgttcttcgccctcccggtggacaagttctccaccacg
tccggccagcacaccaacgccgtgcacggcttcatctcgatgctcgccacgctgctgcgc
gtcgaggagcccacgcacgtggccgtcgccttcgacgccgggtccacgaccttccgcacc
gaggccctccccagctacaagggcacccgcgacgcgacccctgagcccttcaagggccag
gtgccgctcatcaaggaggtcctcgaggcgatgcacgtgcgccacctcgacaaggacaac
ttcgaggccgacgacatcctcgcgaccctgtcgtcgcaggccgacgctctcgggatggag
gtcctcgtctgctccggcgaccgtgactccctgcagttcgtcaacgagaacgtcacggtg
ctctaccccgtcaagggtgtgtccgagctcgcgcgcatgaccccggacgccgtccgcacc
aagtacggcgtggagccgcaccagtatccggagctcgcggctctcgtcggcgagacgagc
gacaacctgcccggcgtcccgggcgtgggccccaagacggcggccaagtggatcaaccag
ttcggcagcctcgagcagatcctcgaccgcgccggcgagatcaagggcaaggcgggggag
tcgctgcgcgaccacctcgacgtcgtgcgcctcaaccgccagctcaaccacctgctcacc
gacgtcgagctgcccttcggccccgacgacctccgcgtgcagccgtgggaccgcgaggcc
atgagcacggtcttcgacgcgctccagttccgcacgctgcgcgagcgcctcttcgcgatg
cacccctcggccgacgacgacgagaacgcggcccccgcggtcgaggtcaccgtcgaggac
ctcgccccgggcctgctcgaggcgtggttcgccgagcacgaccagcgcccgctcggcctc
gaggtcgccggccggcccgtcccggcgggcggcgacgcctgggccctcgccatcgccgac
ggtcccggctcggccgtcgccctcgacctcacggacctctcggccgccgacgacaccgcg
ctgagcgactggctctccgacccgacccgcgccaaggtggtgcacggcggcaagagcgtc
tggcacgagctcgcctcccgcggctactcgctcgagggcgtcgtcttcgacaccgagctc
gccgcctacctctgcttccccgaccagcgcagctacgacctcggcgacctcgccgagcgc
cacctgcaccgcgagctcaccccggtcgacacctcgagcgaccagggtgcgctcgacctg
tcggtcggcgaagacagcgagggcgggcggctcgccgtgcgcgccgccgcactcaccgac
ctcgccgaggtgctccgcggcgagctcggcgaccgcagcgccgagccgctcctcaccgag
ctggagctgccgctgtcggccgtcctcgtgcacatggagcgccacggcatcgccatggat
gtcgactacctgcgtgagctcgagcagcacttcggcgagctcgtcaccggtgccgcggcg
tcggcctacgaggtgatcggccgcgaggtgaacctcgggtcgccgaagcagctccaagag
gtgctgttcgaccagctcgacatgcccaagaccaagaagatcaagaccgggtacacgacc
gacgccgccgccctggccgacctcttcgtcaagacggagcacccgttcctcaagttcttg
ctcgaccaccgcgactcgactcgcctgcgccagaccgtcgaggggctcctcaagtcggtc
gcggacgacggccggatccacacgaccttccagcagaccatcgccgcgaccgggcgcctc
agctcgaccgagccgaacctgcagaacatccccatccgcaccgaggcgggccgccgcatc
cgccgtgccttcgtggtcggtgacggttacgagacgctgctgaccgccgactactcgcag
atcgagatgcgcatcatggcgcacctgtcgggcgacgaagggctcatcgaggccttccgt
accggagaagacctgcacaactacgtcgggtcacgcgtgttccaggtcgagacctcagcg
gtgacgccggccatgcggtcgaagatcaaggcgatgtcgtacgggctcgcctacgggctg
tcgtccttcggtctctccaaccagctgaacatcgacgtcaaagaggcgtcgaagctcatg
gaggactacttcacgcgcttcggcggcgtgcgcacctacctcgccggcgtcgtcgacgag
gcgcgcgccaacggctacaccgccaccatcatgggacgtcgccggtacctgcccgacctc
acgagcgacaaccggcagcgtcgtgagatggccgagcggatggccctcaacgcgccgatc
cagggcagcgcggccgacatcatcaaggtcgcgatgctcggcgtcgagaaggagatcgcc
gtgcgcggcctgcgctcccggctgctcctgcaggtgcacgacgagctcatcctcgaggtg
ggccacggtgagctcgaggagctcaccacgctcgtgcgcgagcagatggggtccgccgcc
gacctgctcgtcccgctcgacgtgtccgtcggcaccggctccagctggcacgacgcgggg
cactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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