KEGG   Sanguibacter keddieii: Sked_22680
Entry
Sked_22680        CDS       T01214                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ske  Sanguibacter keddieii
Pathway
ske03030  DNA replication
ske03430  Mismatch repair
ske03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ske00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sked_22680
   03430 Mismatch repair
    Sked_22680
   03440 Homologous recombination
    Sked_22680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ske03032]
    Sked_22680
   03400 DNA repair and recombination proteins [BR:ske03400]
    Sked_22680
Enzymes [BR:ske01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sked_22680
DNA replication proteins [BR:ske03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sked_22680
DNA repair and recombination proteins [BR:ske03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sked_22680
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655
Other DBs
NCBI-ProteinID: ACZ22183
UniProt: D1BIK6
Position
complement(2520842..2524387)
AA seq 1181 aa
MSSAPPRSEDFVHLHVHTEYSMLDGAARLGDLFEETKRVGQSAIATTDHGYLFGAYDFWK
QATDAGVKPIIGVEAYVTPGTSRFDNTRVRWGDASQASDDVSARGAYTHLTMWARNNEGM
HNLFRASSLASLEGQMGKWPRMDRDLLERYSPGLIASTGCPSGEVQTRLRLGHYDEAVKA
AGELQDIFGKEYFYVELMDHGLDIETRVFKDLLRLAKDIGAPIVATNDLHYVRQEDSGSQ
EALLAINSGSTLTDPDRFKFDGDGYYVKSAAEMRRLWKELPEACDNTLVIAEQCEVSFNT
AANYMPNFPAPAGEDETSWFIKEVETGLQYRYPDGIPTEVRERADFETKVITQMGFPGYF
LVVADFINWSKDNNIRVGPGRGSGAGSMVAYAMRITDLDPLVHGLIFERFLNPDRVSMPD
FDVDFDERRRGEVIRYVTDKYGEDRVAQIVTYGTIKAKQALKDSSRLLGLPYAMGDKLTK
AMPPAIMGKDISLTGIFDPDDKRYSEAEEFRQVHAADPEAQRVVELAKGIEGLKRQWGVH
AAGVIMSSEPLIDIIPIMRRLQDGAVITQFDYPKCEELGLIKMDFLGLRNLTILDDALEN
IVMNGKEAIDLESLTLDDPNTYALLSRGDTLGVFQLDGGGMRTLLKLMRPDNFEDISAVG
ALYRPGPMGANSHTNYALRKNGLQEVVPIHPELEEPLAEVLGTTHGLIVYQEQVMSIAQI
VAGFSLGQADILRRAMGKKKKSELDKQFEGFSGGMVERGYSMAAVKALWDILLPFSDYAF
NKAHSAAYGVVSYWTAFLKANYPTEYMAALLTSVRDDKDKSALYLNECRRMGITVLPPDV
NSSSANFTAVGKDIRFGLTAVRNVGANVVEAIVTTREAKQNFTSFTDFLDKVPAVVCNKR
TIESLIKAGAFDSLDHPRRALQVVHEQAVDSVIGVKRKEAEGQFDLFAGFGDEADDGMSF
SVDIPDLPDWEKKQLLAFEREMLGLYVSDHPLSGLEHVLQQAAEVSIAKLLTDEDRPDGS
TVVIAGLITSLQRKMSKQGNPWAAVTIEDLDGGVEVMFFGETYMAYSTILAEDQVVVLRG
RVRRRDDTMQLQAMEVSLPDISTGTDSPLIITIPRNRCLEQIVVRLRDALKTHPGDAQVR
IHVTEPGKTTVVQAHDQFRVSKSSALSGELKALLGPACLTV
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgtcgtctgcgccccctcgttctgaggacttcgtccacctgcacgtgcacaccgagtat
tcgatgctcgacggggcggcccgcctcggggacctcttcgaggagaccaagagggtcggc
cagagcgcgatcgcgacgaccgaccacgggtacctcttcggggcgtatgacttctggaag
caggcgaccgacgcgggcgtgaagcccatcatcggtgtcgaggcgtacgtcacccctggg
acgtcgcgcttcgacaacacccgtgtgcgctggggcgacgcgagccaggcgagcgacgac
gtctccgcccgtggtgcgtacacccacctgacgatgtgggcccgcaacaacgaggggatg
cacaacctcttccgggcgagctccctcgcctccctcgaggggcagatgggcaagtggccc
cgcatggaccgggacctgctcgagcggtacagcccaggtctcatcgcgtcgaccgggtgc
ccctcgggcgaggtccagacgcgtctgcggctcggtcactacgacgaggccgtgaaggct
gccggtgagctccaggacatcttcggcaaggagtacttctacgtcgagctcatggaccac
gggctcgacatcgagacgcgcgtcttcaaggacctgctgcgcctcgccaaggacatcggc
gccccgatcgtggcgaccaacgacctgcactacgtgcgccaggaggacagcggctcgcag
gaggcgctgctcgccatcaactcgggctcgaccctcaccgacccggaccgcttcaagttc
gacggcgacggctactacgtcaagtccgccgcagagatgcgccgcctctggaaggagctc
ccggaggcctgcgacaacacgctcgtcatcgccgagcagtgcgaggtctcgttcaacacg
gctgccaactacatgccgaatttcccggccccggcgggcgaggacgagacgtcctggttc
atcaaggaggtcgagaccggtctgcagtaccggtacccggacgggatcccgaccgaggtg
cgcgagcgcgccgacttcgagaccaaggtcatcacccagatgggcttcccggggtacttc
ctcgtggtcgccgacttcatcaactggtccaaggacaacaacatccgtgtgggacccggc
cgcggttcgggtgccgggtcgatggtcgcgtacgcgatgcgcatcaccgacctcgacccg
ctcgtccacggtctgatcttcgagcgcttcctcaacccggaccgcgtctccatgcccgac
ttcgacgtcgacttcgacgagcgtcgccgcggcgaggtgatccggtacgtcaccgacaag
tacggcgaggaccgcgtcgcgcagatcgtcacctacggcaccatcaaggccaagcaggcg
ctcaaggactcgagccgcctcctcggcctgccctacgccatgggcgacaagctcaccaag
gcgatgccgccggcgatcatgggcaaggacatcagcctcaccgggatcttcgacccggac
gacaagcgctactcggaggcggaggagttccgccaggtccacgcagccgaccccgaggcg
cagcgcgtcgtggagctcgccaagggcatcgagggcctgaagcgccagtggggcgtccac
gcggccggcgtcatcatgtcgagcgagccgctcatcgacatcatcccgatcatgcgccgc
ctgcaggacggcgccgtcatcacgcagttcgactaccccaagtgcgaagagctcgggctc
atcaagatggacttcctggggttgcgcaacctcaccatcctcgacgacgccctcgagaac
atcgtcatgaacggcaaggaggcgatcgacctcgagagcctcaccctcgacgacccgaac
acctacgccctgctctcccgaggggacacgctgggcgtgttccagctcgacggcggcggc
atgcgcacgctgctcaagctcatgcgtcccgacaacttcgaggacatctcggccgtcggt
gcgctctaccgtccggggccgatgggtgcgaactcgcacaccaactacgcgctccgcaag
aacggcctgcaggaggtcgtcccgatccacccggagctcgaggagccgctcgccgaggtc
ctcgggaccacgcacggtctcatcgtgtaccaggagcaggtcatgtcgatcgcgcagatc
gtcgccgggttctcgctcggccaggcagacatcctgcgtcgtgccatgggcaagaagaag
aagtccgagctggacaagcagttcgagggcttctcgggcggcatggtcgagcgcggctac
tccatggccgcggtcaaggcgctgtgggacatcctgctgccgttctccgactacgcgttc
aacaaggcccactcggccgcgtacggcgtggtctcgtactggacggcgttcctcaaggcg
aactacccgaccgagtacatggcggcgctgctcaccagcgtccgcgacgacaaggacaag
tcggcgctgtacctcaacgagtgccggcgcatgggcatcacggtgctgccgccggacgtc
aactcgtcgtcggcgaacttcaccgccgtcggcaaggacatccgcttcgggctgacggcc
gtccgcaacgtgggggcgaacgtcgtcgaggcgatcgtcaccacgcgggaggcgaagcag
aacttcacgtccttcacggacttcctcgacaaggtcccggcggtggtctgcaacaagcgg
accatcgagtcgctcatcaaggccggggccttcgactcgctcgaccacccccgccgcgcg
ctccaggtggtccacgagcaggcggtggactcggtgatcggcgtcaagcgcaaggaggcc
gaggggcagttcgacctcttcgccggcttcggcgacgaggcggacgacgggatgtcgttc
agcgtggacatcccggacctgcccgactgggagaagaagcagctgctcgccttcgagcgg
gagatgctcgggctctacgtctcggaccacccgctctccgggctcgagcacgtgctgcag
caggccgccgaggtgtcgatcgccaagctgctcaccgacgaggaccgcccggacggctcg
accgtcgtcatcgccggtctcatcacctcgctccagcgcaagatgtccaagcagggcaac
ccgtgggccgcggtgaccatcgaggacctcgacggcggcgtcgaggtgatgttcttcggc
gagacgtacatggcctactccacgatcctcgccgaggaccaggtggtggtgctgcgcggt
cgcgtgcgccgccgggacgacaccatgcagctccaggccatggaggtgtcgctgcccgac
atctcgacggggaccgactcgccgctgatcatcacgatcccgcggaaccggtgcctcgag
cagatcgtggtcaggctgcgtgacgcgctcaagacgcacccgggcgacgcccaggtacgg
atccacgtcaccgagccggggaagacgaccgtggtccaggcgcacgaccagttcagggtg
tcgaagtcctcggcgctgtcaggcgagctcaaggccctgctgggacccgcctgcctcacc
gtgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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