KEGG   Saccoglossus kowalevskii (acorn worm): 100366657
Entry
100366657         CDS       T04123                                 
Name
(RefSeq) serine--tRNA ligase, mitochondrial-like
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100366657
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sko01007]
    100366657
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sko03016]
    100366657
Enzymes [BR:sko01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     100366657
Amino acid related enzymes [BR:sko01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   100366657
Transfer RNA biogenesis [BR:sko03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100366657
 Prokaryotic type
    100366657
SSDB
Motif
Pfam: Seryl_tRNA_N Translin DUF87 Occludin_ELL Cortex-I_coil Baculo_PEP_C DUF1204 TMPIT DUF6779
Other DBs
NCBI-GeneID: 100366657
NCBI-ProteinID: XP_006816001
Position
Un
AA seq 476 aa
MFWFLRLLCTVVIVTRSMLWFCVKLSKINTGHQMASPIIHLCHNLRLFHGVINDRVYMIH
IACRQVNAFICRSSSTLYTPVSKGERVPFISRPDIDISGIMNNIDLMERNVKARNTLIDF
KALASLWKDMQQHKVAVDQLEIQKKKVNQLVKKVKQENSTSDEIQQMKDESKRLRNELKK
IKSLYSNVSEELYNIVLKLPNFTHSNTPSGMTELITHRFGDQLKLQPWIKNHVVLGKVLD
VLSFEHSHVQPGVCYLKKEAALLEQGLLFWMSDKLKENNCLHLCCPEMFKPIIVEGCGLE
LEDPSQVYSVIASDDVLHLAGVSIMSLAANYMMAVFEYDSLPHRYGVHFLVIEIDSVDIL
CFTFGRNYDPSKESKTFSSLCSMQQSSMVASVYNCTDFISRRLKFRYPCNPSESAVISRK
RHYCHTVFGTAMCVPSVIAILLENCQQKDGSVVFPSALWPYTFGCQGIDVKTLEQD
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgttttggtttttacgtctgttgtgcactgtagtaatcgtaacgagaagtatgctgtgg
ttttgcgtcaaactgtcaaaaattaatactggacatcaaatggcttcgccgataattcat
ttatgtcataacttaaggttattccatggtgtgatcaacgatcgtgtttatatgatccac
attgcttgccgtcaagtgaatgctttcatctgtagatcatcttctacgttgtacacgccg
gtcagcaaaggagagagggtgccctttatcagtcgaccagacattgatatcagcggtatt
atgaataatatcgatttaatggaaaggaatgtgaaagccaggaatacgttgattgatttc
aaagctttggcatctctatggaaggatatgcaacagcacaaggttgcagttgaccaactt
gaaattcagaagaaaaaagtgaatcagttagtgaaaaaggtcaaacaggaaaactcaact
tctgatgaaatacaacaaatgaaagatgaaagtaaacggctacgaaatgaattgaaaaaa
attaaaagtttatattctaatgtatctgaagaattatacaatattgtactgaaactccca
aactttacacattctaacacgccatctggtatgactgaacttataacacatagatttggt
gatcagctaaaattacaaccatggatcaaaaaccatgtggttctgggaaaagtcttggat
gtcctgtcctttgaacattctcatgttcaacctggtgtatgttatctcaaaaaggaggct
gctttacttgagcaaggtctgctgttttggatgtctgacaaattaaaagaaaataattgt
ttacatctctgctgtccagagatgttcaagcctattatagtggaaggatgtggattagaa
ctggaggatccatcacaggtttactctgttatcgctagtgatgatgttctacatcttgct
ggagtctccattatgtcattggctgctaattacatgatggctgtttttgaatatgacagt
ttaccgcataggtatggtgtacattttctcgtcattgaaatcgattctgttgacatactg
tgctttacatttggtcgtaattatgatccatcaaaagagagcaagacattctcaagttta
tgcagtatgcagcaatcaagtatggtagcatctgtttataactgcactgattttataagt
cgaagattaaaatttagatatccatgcaatccatcagagtctgctgtaatcagtcgtaaa
cgacattattgtcacacggtgtttggtacagcaatgtgtgttccatctgttatagctatt
ttgctagaaaactgccaacaaaaggatggttctgtcgtatttccctcggctttgtggcct
tatacatttgggtgccagggaattgatgtcaagactctggaacaggattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (59)   

Download RDF
DBGET integrated database retrieval system